Gene detail

Detailed information of amur_s0094.g56.t1 in Acropora muricata

Genomic Location: sc0000094_pilon:756571...770522
NR annotation: XP_029189909.2, sodium-coupled monocarboxylate transporter 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amur_s0094.g56.t1

CCTATTTGCATTAATGAACGCCTTCTTCATTTCATTGCTCCCCAGTCTATGCACTTCTTTTGTTGGTTCAACTGAGATATCCTAGCCCACCTCAAAAGTTACTCGCCGTTCTTTGTTAGCTATGGCCGGAGATCGCTTTAGTGTCGTTGACTATGTTGTCTTCTCCGTAATGTTGTTGATATCAGCGTTCATTGGAGTGTGGCACGCTTGCAGAGGTGGAAAACAGAACACCACAGAAGAGTATCTATTGGCCAACCGAAAGATGAAATTCTTGCCCGTATCCATATCGATATTACTGTCCTTCCTTTCAGCAATAACGCTTCTTGGTATTCCAGCAGAAATATACGTTTACGGAGCTCAGTTCTTTATGACAACCATTGCCTATCTTTTGATATGCATCGTAGTCAGCACCGTGTTTATTCCAATGTTTAGACGCATCAAATTGACCAGTGTTCATGAGTATCTAGAAAGGCGCTTTTCCTTGGGCATTAGAATATTGACTTCGTGTTTATTCATCCTAACAGTCACATTGTACCTGTTTGTGGTGTTGTTTGCTCCCTCGCTGGCTTTGGAGGCAGCCGCTGGAGTTCCGCTCACATTGTCAATCCTAGCCACAGGAGCTGTATGCACATTTTACACAGCTTTGGGTGGTCTGAAAGCCGTTGTGTGGACCGATGTATTCCAGGCAATTGTAATGCTGGCGGGTCTCATTGCTGTGGCCATTTCTGGAACGATGCAGATCGGAGGCGTAAAGAAAGTCTGGGAGATCAACGACAACTACGGAAGACTCAACTTTTTTGACTTTAACCCAGACCCTAGGATACGCAACACTTTCTGGTCACTTACGATTGGCTTGGCAATGACTCTGCTTCCTCTCTGGGGTTTGGCTCAGTACTTCGTCCAGCGATATCTTGCTATTAAGACTCTGAAGGATGCAAAAAGGGCAATATGGCTGAATGTTCCATTTCTTTTTATTGTGATAGCCATCACTGTTTTTGACGGAATGGTGATTTTCGCTATGTACGCTGGATGTGACCTTCTTACGACTCGCAAAATTGCAAGGGGTGATCAGGTTCTTCCATATTTTGTAATCGACAAACTTGGACACCTAACGGGTTTGCCGGGGTTGTTTACCGCCTCTCTTTTCGGAGCTGCTCTCAGCACGATATCATCAGCAATAAACGCATTGGCCATGATTATCCTTGAAGATATCGTGAAGAAAAAAATAAAACTTACGGATTCTGAAGCCACAAAAGTCAGTAAATTTATCGCTGTGTTGTTCGGGGTTATAACAATGGGAGGCGCATTTGGTGTAAAATACGCTGGAGCAATGGTACTACAGCTCGCTTACAGCATCTCTGGCCTAACAGGAGGAATATTACTGGCTTTGTTTCTTTTGGGGTTTTTCGTTCCCAGAGCAAATTCAAAGGGTATGTACGTTGCAACCGTCGCAAGTCTGACTGTAGTTTTCTGGCTGCTAGCAGGTTCAATCGTGTATCCACCAAATCGTTACCCAGGCATCCGTTCGGTAAGGGAATGTCCATTCTATCAAGACGCCCTCGCGGCGAACTCGTCCATTATCAATGGTACGAGCGTGCACAACAACAACGAAACCACAAGCATTTTTGCCAAGTATGGCGATGGAATCATCAGAAGTTCTTTTAAGCCGTATACAAGTGTGCCATTAGCCGATTTTTACAGCTTGTCGTATCTGTGGGTGTCTACTGTTGGGTTTATTGTAGCGGTGGTTTTCGGGTTGATTGGCAGCTTCGTTCTCGAATCAAAAGAAGATAGACGAAGGCATTTGGATCCCAAGCTCTTGTTCCCATTAAAAGCCTGGTTGCAGGGATTTTTGCCTGGACACCAATTCAGCTGGGAAGAGGAAGATGCAAAGTGTTTATACGATCTTGAGGATGCTTGGAAAGATGAAAACCCATCAGAGAAAGCGTCTACGCCGACAAGCTCAATGTTGTTGCAAAGTCAAACCGAGTTTTGACCAGCAAAAAGATAAATGCAAAACTTCCAAAATTTTTTATTGCTCTTGCTGAAAGAAACATATAACGGGGGAAAAAAGACAATGTATTAAGCGTGTGTTTCGTAATTTTAACTCATTATCCAAACATTGAGATGGTTCGCTATAAGCTTTTATTCAAAGGGTCGGGAGAGAGGGACTGGGAACGATAATCAAATATCTGCGGCATC

Protein

Uniprot

Uniprot term	Description
Q8N695	Sodium-coupled monocarboxylate transporter 1 OS=Homo sapiens OX=9606 GN=SLC5A8 PE=1 SV=2
Q8BYF6	Sodium-coupled monocarboxylate transporter 1 OS=Mus musculus OX=10090 GN=Slc5a8 PE=1 SV=1
Q9Y289	Sodium-dependent multivitamin transporter OS=Homo sapiens OX=9606 GN=SLC5A6 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00474	SSF	Sodium:solute symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001734	Family	Sodium/solute symporter	Interproscan
IPR051163	Family	Sodium:Solute Symporter (SSF)	Interproscan
IPR018212	Conserved_site	Sodium/solute symporter, conserved site	Interproscan
IPR038377	Homologous_superfamily	Sodium/glucose symporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42985	SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0006814	Biological Process	sodium ion transport	Interproscan
GO:0015293	Molecular Function	symporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14386	SLC5A6, SMVT; solute carrier family 5 (sodium-dependent multivitamin transporter), member 6	-	Transporters	ko02000	deepkoala