Gene detail

Detailed information of amur_s0108.g74.t2 in Acropora muricata

Genomic Location: sc0000108_pilon:1029716...1033532
NR annotation: XP_015758910.1, PREDICTED: ras-related protein Rab-1A [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amur_s0108.g74.t2

CACGCCAAGTTGCACTCAGGTCGCTTCCTCTTGTAAGGAAAAGGAAGATATTCGCCGGTAATTGTACATCGTCCATTGAAAATTTAACTTGGCACAAAGCTTAGTTGACGAGGAGTGGAAAAGGGAGCGAGACAGCCTAACATGGCCGGTTTGAATCCCGAATATGATTACTTGTTCAAGCTTTTACTTATTGGAGACTCTGGTGTAGGCAAATCGTGCTTACTTCTCCGGTTCGCGCCTCTGTTATTTGGATATTAGAAATGCCAAACACAAGTCCTTTCGAAAGGTGGCCTGTAATTAGCAAAGTGAACAACACTTTGCCCTTCTGTTCTGCTCAGAACACAATAATTTTTAATTTAATTGTGTAATTTcagggcatgaaattgcacttaatacagtcgccaatgcaactaaaattatcgtgctggcgacagagattcaaaagttagtcgccaagttgacgatcagaactctttgggttttgtacatcttaccttgatgttttttgcaacttcatgaagctttaaagtagatgaatccgcgggaacgataaggtctgttaagcaaaattgtcacgaatactatgaactgaacatgtcaacatctgccatcttggattttccaaatgttaggttgtatattgtgaagtgaaatgtcctttttggtcgcgcagacacttcacttcaaagctaggaaaacccttccatttgacgctactgtataatgtgttttttcaactatcttttttttttattaatggctcctaactttttggccttggcgacctctttggaaaatgtaggagccagatggctccttgccaaaaaagttcatttcctgccctgATCATTATGAATGTGTTAAGATGGTATCAAGTATCATTTTAAAACTGGCTTTTGTAGACTGGCATTAATTATGATTATTTAAGCCAGTCTACAAAACCCTCATTACCATGTAAGGAAAATCTTCATTAACTTTCTGTCCTAATCTTTTGCATTAATTTCTTGATGTTTCTTGCATTGCAGGAATCTTTCAACAATGTCAAGCAGTGGTTACAGGAAATCGACCGATACGCTTGTGAAAATGTTAATAAACTTCTCGTGGGAAACAAATGTGACCTCACAACAAAGAAAGTAGTGGACTTCACAACAGCAAAGGAATATGCAGATTCACTGGGGATACCATTCTTGGAAACAAGTGCGAAGAGTGCTACAAACGTCGAGCAGGCATTTATGACAATGGCAGCAGAAATTAAGAATCGTATGGGACCAGCGCCGGCACCTGGAACTAGTAATGTCAAAATTGACTCCAGTACACCAGTTAAGCAAGGAGGAGGTGGATGCTGTTAGTTAAAAAGCTAAGGCAACAATTGAGAGACCATGTGGTTTAAGTTACTTCCTCATAAGCACCTCTGGAATTTGAGACTTTGGAAATGCAATAGTACCCCCCATATACTTCTTTTCACAAACTGAATTATTCTTCACTGACTTTGTCTTGAAAAGGGGTATATGCTCATTCTGTTACAACTAAAGCTACTACTGAAGAAAACTTTCCCTGCATGGCAGAGAAACAGCAAATTTAAAGCTTCTTTTATCTTTTGTATTTCTTGCTTTATTCCAAGGCAGATCTTTGACTTTAGTTAGAGAAGTCAAGGATGCTGTCACTGATGCCTTGTTTGTCAATGAACGCTGCAAAACTTATACTGAATGTGTTCTTTGGCCAAACCGCTTTTATCCTGACTATTTATTCTGGTCTTCATAACTCTGAATGATCAAGGATTGACTGCACTGTAATGCTAATTGGCGAAGGGAAAATGAGGTTGTTGAATAGAGATGATTGAAATCACTCTTTGAGGGGAAAATCACAAGTTTATTTATGTTTTCAAGTTAAATGTAGGGGCATGTAGCTGAAATTTTTGTGGGCACTTTAGTCTTTGCTTTAGAACTGATCAATATAGATGGGTTGTTTTATAGAGATGTTGCTATCTGTTATAACCAAAAAGTGCATACTTAAAATTGGTGAATCCTAAGGCCAATGTTAAGATCTTCAGCTTCTCCCAAATTCTCAATGTAAAAACTGTTACATGGCTGTTGATGCTCTAAACAAAGAATTATTCTCTATTTTGTCATCTGTTCAGTAAGTAGATTGATAAAGAGGTTTAGCTGTAGTTATAATAATTTGTTACAAATACATTCAAGAAAGCATTTTTGTGTAATTTTCATGTTGTGATGGATCATCTTTCACTTGTTAGCCTATTGATAAAGGCCTGCAACCTCCTGTACAAAACTGCTCCAGACTCCATGACTGAAAAGAAGAGTTCACAATAATCTGTTTCAGAACAT

Protein

Uniprot

Uniprot term	Description
P62822	Ras-related protein Rab-1A OS=Canis lupus familiaris OX=9615 GN=RAB1A PE=1 SV=3
P62820	Ras-related protein Rab-1A OS=Homo sapiens OX=9606 GN=RAB1A PE=1 SV=3
P62821	Ras-related protein Rab-1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806	Family	Small GTPase	Interproscan
IPR050227	Family	Ras-related protein Rab	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47977	RAS-RELATED PROTEIN RAB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan