Gene detail

Detailed information of amur_s0118.g6.t1 in Acropora muricata

Genomic Location: sc0000118_pilon:97126...119389
NR annotation: XP_044179281.1, uncharacterized protein LOC114964282 isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

amur_s0118.g6.t1

atggaaaacagggagcatgttatgaaaccatctgaagaccaacattctgtgagtgagtctggagTGGCTGGTgggttttgtccacattcccaggaatacaaagagccaccacaggtctgtttcgagcagaaaaatgctggtgatcttccaaactccacagaaacatggagtgatgatcatctgccaattgatattatgttattgactgtggagagctgtgattttttgaactgtttctccttgctggataaaccattcaaaagttacaagaaggagattggttatgtgtactttgggggcattggagataccagtgatcaggaaaagttaaaaattgcattggtaaagtgcggtaaaggagctgcaacaccaggaggctctttgacagcagttctgaatgcagttagagttttgcggcctaaggctgcattttcagtgggaacttgcattagtttaggcttggagaatgtcaaaatgggagatgtagtcatatcctgtaaactaactgcagagggattcagaactcctgtcagcccacttcttagccgtcttattcaagatgcaccttatgggtgggttgcaccgttgcaaaatccagatgaaatgaaagttaaagtacattgtgatggtgatatcctgagccagtcactgagagacaagtgtcgatgtgatgatgtttttgagcgatatcctggggcagttgcaattgagacagaaggcgaaggtctgtatgctgcagcctatgatgcaaatattgaatgggtgatagtgaaaggtgtggccagttattttcatcaaagccagtctgcaacttctgaatggatgtcttttgcaagcaccatggctgcctctatggtggccaagatgctaaaggatccaacagtgttccgggaatggccacactataaccaaggtgtacggtatggaacgtctgaagaccagcattccttgcggtgccatggagttgctcaggaatacctagtgactcagaaaatgaaggaggagcttaagcttgagacaaattgcctgaagacaatcatacataaggaaaactacttgaactgcaagaaggctctcatggagcttccaagtacgtattcagGTAACATAACAAGAAATCCCAACATGGCGATCCCTCTCTGCCTCCCCAACAACTGCCGTTGGGATGCTACCACTGGTAGATGCTCCGAGACAGGGGAATGGCGATCTTCGCTTGTTATTGTTGATGAAGCTCTGCAAAAACTTAGTACTTTGAAAGAACCATGTTCACAGGATGACAAAGCAGGCAAGGTTGCTGAAAGTATCCTTAACTTTTTCCCTGGCTTTGAAGCTTTCAAGCTCCGTCCTCCTTCGTCAGATCCGGAAGTGCTCATGAATCTTAATCGCGAAGAATTTCAACATAACATCAACAAATCATTCATTAGAGAGGTGCAAGAATTTAAAGTGATGCTGTTCTCCAAGCTTTCTCCCAAGCGAAGTTTTCAAGATGGGGTATATGTTACTGGAGAAGATGTTTCGTATGCTAGGCGACTGTACCATACATTTTTAAAATTAATGCTTCGCATTGGAAATCTCAAGTCTATGTATAAACTGAATTGCATTATCAGCGTGGAGTACACAGAGAACAAATTGAAAGCATTGCAAGAACGTAACAGTGATCTTACCAGAGAGAAATGCCATGCTCTTCTAAAGCGCCTGAAAAAAGAGAGATTGGATCCAATCCTTGCACTACTGGCTACTGAAGGTGGCTCCTTAGTCCGTTTTGCTGAGATCATTGACGGATACTCGGCCATCGAAGAAGGTTTCAAGAGCCAATCTAGAGGAGCAAAGGATGTTTGTGCCCAGGTGTTCTACGAGTTCCACCCGATGAAGCTGCTACAGGAAAAACGGGAGGAAGACAGAAGACGCTTGAAAGAGCAGTTTAGAGCTGACATGCAATCTCAAAGAGAGCAAAGGAAGGACATGATGACAGCCAATATGGATGAGCTGCGATTAAAGAGGCAGGCGATGATTGATCAGAACCAAACTCTACAGGACACCATCAGAAGCATGAACGAGGCTATGGAGAGGCGAAATGCCCAGATGCTAGAGCTTCAGAATCAGCTTACTGAACTAGCCAATCATCCTCCACCTTCCCCACCAAGTGGGGATGGTGGATGCGTCATTCTCTAA

Transcript

amur_s0118.g6.t1

acctctacaactccagctcaaactgtagcagcagctaattcacgtgaagaaaaaacaagttcaatcctagcaacatattgctgtcctagctgatctcacaacaatgtaccaccatctttgatacagatgatgtagtgactttttgcagtgaaaatggaaaacagggagcatgttatgaaaccatctgaagaccaacattctgtgagtgagtctggagTGGCTGGTgggttttgtccacattcccaggaatacaaagagccaccacaggtctgtttcgagcagaaaaatgctggtgatcttccaaactccacagaaacatggagtgatgatcatctgccaattgatattatgttattgactgtggagagctgtgattttttgaactgtttctccttgctggataaaccattcaaaagttacaagaaggagattggttatgtgtactttgggggcattggagataccagtgatcaggaaaagttaaaaattgcattggtaaagtgcggtaaaggagctgcaacaccaggaggctctttgacagcagttctgaatgcagttagagttttgcggcctaaggctgcattttcagtgggaacttgcattagtttaggcttggagaatgtcaaaatgggagatgtagtcatatcctgtaaactaactgcagagggattcagaactcctgtcagcccacttcttagccgtcttattcaagatgcaccttatgggtgggttgcaccgttgcaaaatccagatgaaatgaaagttaaagtacattgtgatggtgatatcctgagccagtcactgagagacaagtgtcgatgtgatgatgtttttgagcgatatcctggggcagttgcaattgagacagaaggcgaaggtctgtatgctgcagcctatgatgcaaatattgaatgggtgatagtgaaaggtgtggccagttattttcatcaaagccagtctgcaacttctgaatggatgtcttttgcaagcaccatggctgcctctatggtggccaagatgctaaaggatccaacagtgttccgggaatggccacactataaccaaggtgtacggtatggaacgtctgaagaccagcattccttgcggtgccatggagttgctcaggaatacctagtgactcagaaaatgaaggaggagcttaagcttgagacaaattgcctgaagacaatcatacataaggaaaactacttgaactgcaagaaggctctcatggagcttccaagtacgtattcagGTAACATAACAAGAAATCCCAACATGGCGATCCCTCTCTGCCTCCCCAACAACTGCCGTTGGGATGCTACCACTGGTAGATGCTCCGAGACAGGGGAATGGCGATCTTCGCTTGTTATTGTTGATGAAGCTCTGCAAAAACTTAGTACTTTGAAAGAACCATGTTCACAGGATGACAAAGCAGGCAAGGTTGCTGAAAGTATCCTTAACTTTTTCCCTGGCTTTGAAGCTTTCAAGCTCCGTCCTCCTTCGTCAGATCCGGAAGTGCTCATGAATCTTAATCGCGAAGAATTTCAACATAACATCAACAAATCATTCATTAGAGAGGTGCAAGAATTTAAAGTGATGCTGTTCTCCAAGCTTTCTCCCAAGCGAAGTTTTCAAGATGGGGTATATGTTACTGGAGAAGATGTTTCGTATGCTAGGCGACTGTACCATACATTTTTAAAATTAATGCTTCGCATTGGAAATCTCAAGTCTATGTATAAACTGAATTGCATTATCAGCGTGGAGTACACAGAGAACAAATTGAAAGCATTGCAAGAACGTAACAGTGATCTTACCAGAGAGAAATGCCATGCTCTTCTAAAGCGCCTGAAAAAAGAGAGATTGGATCCAATCCTTGCACTACTGGCTACTGAAGGTGGCTCCTTAGTCCGTTTTGCTGAGATCATTGACGGATACTCGGCCATCGAAGAAGGTTTCAAGAGCCAATCTAGAGGAGCAAAGGATGTTTGTGCCCAGGTGTTCTACGAGTTCCACCCGATGAAGCTGCTACAGGAAAAACGGGAGGAAGACAGAAGACGCTTGAAAGAGCAGTTTAGAGCTGACATGCAATCTCAAAGAGAGCAAAGGAAGGACATGATGACAGCCAATATGGATGAGCTGCGATTAAAGAGGCAGGCGATGATTGATCAGAACCAAACTCTACAGGACACCATCAGAAGCATGAACGAGGCTATGGAGAGGCGAAATGCCCAGATGCTAGAGCTTCAGAATCAGCTTACTGAACTAGCCAATCATCCTCCACCTTCCCCACCAAGTGGGGATGGTGGATGCGTCATTCTCTAAACTGGAAAATCCCAAACTTTGATGAATAAACCGCAATAGTGGGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01048	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000845	Domain	Nucleoside phosphorylase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46832	5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008782	Molecular Function	adenosylhomocysteine nucleosidase activity	Interproscan
GO:0008930	Molecular Function	methylthioadenosine nucleosidase activity	Interproscan
GO:0019284	Biological Process	L-methionine salvage from S-adenosylmethionine	Interproscan