Gene detail

Detailed information of amur_s0145.g37.t2 in Acropora muricata

Genomic Location: sc0000145_pilon:634682...670031
NR annotation: XP_044167157.1, uncharacterized protein LOC114974411 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

amur_s0145.g37.t2

ATGCCATGCAAAGCGGCTACGGGTTTCCCACAGTGTGACATCAACAATTGCTCTAATGACAGACTAAGGGGCAAAGGAGGGATTACCTGTGGTCTAGTAAATAAATCCTTGGTTTGGTTTGACGGTAGGATAGTGTATGCCCTACATAGTATTGATTTTGTTTATTGTTCACCCTTTCCAGGTGGATTCACCTATTTTCAAAGTTGCTCAAGTGGTCAAACAGATTGTCATGCAAGGTTAAGCAGTCCACTTATCAGTTCTGGAGCAAAGTGGAAGTGTTTGCAGTTCTGGTATTACACAGCATACCCCGGCCAACTGAAGGTGCTTTTGGTCCCTGAGGAAACAACTTCGCATACATTGAAGACATATAATTATAACTCCTACGGCTGGAGACTAGAGCGTGTGCCTCTTAGTGCAAACTTTACTTATCAGGTTGTCTTCGAAGGCAGTCTACGTGGATTTTATGGTGCAGACTTCCTTGTTGCAGTGGATAATGTGGTATTTCTAACAGATGAATGTAGAGAAAGGCCTTCGCGATattgtccttccagctgtgtttattttcctgtctcttccaaaagtcaagacatggtggtcaccattgaggaaggaaaagaagttacttatataccaaagacatttccaacaaacacaaccgtaatcttttttcaaggaaataaaatttggtatatagagaaaacatcgttttcagggcttttgaagctgaaatacttggatctgagtagaaaccacattttcagagtagatgatggtgcatttttcgacactgtggcattggaaactttgaagcttgacatgaattttattacaaccttgcctatcagcacttttgggaaattggaaaatttgcggacattagattgcagcctcaatttgatgaaagaaattccttcctctgcgctcgcatcgttattccaactgaaaactttGAGCCTTAGATCAAACCGGATTAGCAAGATCGAAAAGAATACATTTAATTACTCAAGGAATTTAAGTTATTTATATCTTCAAAAGAATACATTAGAGGTGTTACCTTATGAAGGTTTTAATGGATTATCAAGACTTAAAATTCTagacatcagttcagtttggaaaaaatctctggtgccgcgtcactgggaagatcatccggcttcaagttcatcaaaccacaggtcgagacacaatccaggcacatcatcgaagacagtacatgaggtgctagagcatggacctgaaaAaggcttgaagattgtgaacactgcaagcatattacccaAagaaacttcagacttagtgggttttgtggtCgcgtgtcgtgaaaatggaaaagaaActgccatgagactgataaagcacttttcgagtgaatgcgaagacgattgggaaaaggagtctggccttgtTaacgTacttggggaaactgagcaccctaacatcctcAcatactgctggcactgtaaaGCTCAAGAGTGCGTTCTGAATTTCAAGCAAACGCTGTTTCCACGACTCGGGAAAAGTGCCTTCTTACTGTGTTACGACTTCCCCGAAAGCACGCCACTGGACGAATATTTGAAAAACAAAAAGATCGTTCTCAACTTGGACACTCTTTTTGTTTTGGCCGTGGATTTGATCGATGCCATACAGTGCTTGGAAAACAGAGGCATCGTGCACAACAACATAACAACGTCTACTGTGCTGATAGCAGAAGGATTAAGGgaTggccacatcagtgccatgagtagccgatttctaaggaacgagCgattcttcagaacttgccgcagggtaccaccagtgaaagccatcttggctggtttcggctcaagtcagcttgttcctcggaatgtccctgattgcaaggaaataggtcgcaccaataaagagattttggggaagaacgttgtgcagttcggttgtgtgctgtctgaattgataagaagttgcaacgagtcccaagaatctgatgagcttcaaggaattgtgcatctgtgctttgagcaggacgcggatgttcgaccaagtgcttctcaaattggagacCtgctgagagacctgtgTcaccaaaatgacatctgggatAcaCcagtgtaa

Transcript

amur_s0145.g37.t2

TTGTCTCTGGTTGGCTTGCAATATTTTTCAACGAGAGCAGGTAAATCAAAATGTATATTCAGTATACATTGCAAACCTTATACACAGGCCAATAAAAATTATCGTACTTGAAACATTCATGCCATGCAAAGCGGCTACGGGTTTCCCACAGTGTGACATCAACAATTGCTCTAATGACAGACTAAGGGGCAAAGGAGGGATTACCTGTGGTCTAGTAAATAAATCCTTGGTTTGGTTTGACGGTAGGATAGTGTATGCCCTACATAGTATTGATTTTGTTTATTGTTCACCCTTTCCAGGTGGATTCACCTATTTTCAAAGTTGCTCAAGTGGTCAAACAGATTGTCATGCAAGGTTAAGCAGTCCACTTATCAGTTCTGGAGCAAAGTGGAAGTGTTTGCAGTTCTGGTATTACACAGCATACCCCGGCCAACTGAAGGTGCTTTTGGTCCCTGAGGAAACAACTTCGCATACATTGAAGACATATAATTATAACTCCTACGGCTGGAGACTAGAGCGTGTGCCTCTTAGTGCAAACTTTACTTATCAGGTTGTCTTCGAAGGCAGTCTACGTGGATTTTATGGTGCAGACTTCCTTGTTGCAGTGGATAATGTGGTATTTCTAACAGATGAATGTAGAGAAAGGCCTTCGCGATattgtccttccagctgtgtttattttcctgtctcttccaaaagtcaagacatggtggtcaccattgaggaaggaaaagaagttacttatataccaaagacatttccaacaaacacaaccgtaatcttttttcaaggaaataaaatttggtatatagagaaaacatcgttttcagggcttttgaagctgaaatacttggatctgagtagaaaccacattttcagagtagatgatggtgcatttttcgacactgtggcattggaaactttgaagcttgacatgaattttattacaaccttgcctatcagcacttttgggaaattggaaaatttgcggacattagattgcagcctcaatttgatgaaagaaattccttcctctgcgctcgcatcgttattccaactgaaaactttGAGCCTTAGATCAAACCGGATTAGCAAGATCGAAAAGAATACATTTAATTACTCAAGGAATTTAAGTTATTTATATCTTCAAAAGAATACATTAGAGGTGTTACCTTATGAAGGTTTTAATGGATTATCAAGACTTAAAATTCTagacatcagttcagtttggaaaaaatctctggtgccgcgtcactgggaagatcatccggcttcaagttcatcaaaccacaggtcgagacacaatccaggcacatcatcgaagacagtacatgaggtgctagagcatggacctgaaaAaggcttgaagattgtgaacactgcaagcatattacccaAagaaacttcagacttagtgggttttgtggtCgcgtgtcgtgaaaatggaaaagaaActgccatgagactgataaagcacttttcgagtgaatgcgaagacgattgggaaaaggagtctggccttgtTaacgTacttggggaaactgagcaccctaacatcctcAcatactgctggcactgtaaaGCTCAAGAGTGCGTTCTGAATTTCAAGCAAACGCTGTTTCCACGACTCGGGAAAAGTGCCTTCTTACTGTGTTACGACTTCCCCGAAAGCACGCCACTGGACGAATATTTGAAAAACAAAAAGATCGTTCTCAACTTGGACACTCTTTTTGTTTTGGCCGTGGATTTGATCGATGCCATACAGTGCTTGGAAAACAGAGGCATCGTGCACAACAACATAACAACGTCTACTGTGCTGATAGCAGAAGGATTAAGGgaTggccacatcagtgccatgagtagccgatttctaaggaacgagCgattcttcagaacttgccgcagggtaccaccagtgaaagccatcttggctggtttcggctcaagtcagcttgttcctcggaatgtccctgattgcaaggaaataggtcgcaccaataaagagattttggggaagaacgttgtgcagttcggttgtgtgctgtctgaattgataagaagttgcaacgagtcccaagaatctgatgagcttcaaggaattgtgcatctgtgctttgagcaggacgcggatgttcgaccaagtgcttctcaaattggagacCtgctgagagacctgtgTcaccaaaatgacatctgggatAcaCcagtgtaaactaTTGaaggaTGgGcttttgcaagtGatacTaacttcactaatcaacaacagtaattttt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00629	MAM	MAM domain, meprin/A5/mu	Domain	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000998	Domain	MAM domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR050328	Family	Multifunctional Developmental and Immune Receptor	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24373	SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan