Gene detail

Detailed information of amur_s0168.g16.t1 in Acropora muricata

Genomic Location: sc0000168_pilon:257052...267245
NR annotation: XP_015763721.1, PREDICTED: T-complex protein 1 subunit zeta-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amur_s0168.g16.t1

NNNNNNNNNNNNNNNNNNNNTTAATGCTTGTGATCTAAATGAGCTTGGGTTACCGCTCTGTTTGTTTCAGTGAGGTCAATTCTGGGTTCTTCTACAAGAGTGCAGATGAAAGGCAAAAACTTGTTGATGCCGAGAGAAAGTTTACAGATGACAAAGTTCAGAAAGTTATTGACTTGAAAAGAAAGGTTTGTGAAGGAAATGACAAAGGATTTGTGGTTGTCAACCAAAAGGGGATTGATCCTTTATCTTTGGATATGCTGGCAAAGGAAGGTATCGTAGGGCTTCGACGTGCTAAGAGAAGGAACATGGAGAGACTGACCCTTGCATGTGGGGGTATTGCCATGAATTCCTTTGACGACTTGACATCAGATTGTCTGGGACATGCTGGACTGGTCTATGAACATGTCTTGGGAGAAAGTAAATTCACTTTTATAGAAGACCTGAAAAATCCTTTGTCTGTGACGATTCTCATCAAAGGTCCCAATAAACACACACTGACGCAGATCAAGGATGCAGTTCATGATGGCTTGAGGGCAGTAAAAAATGCCATTGAAGATGGAAGTGTTGTACCTGGTGCAGGTGCGTTTGAGGTTGCTGTCAATGCAGCCCTAACAGAGTTCAAAATGTCAGTAAAGGGTAGAGCAAGACTCGGTGTCCAGGCCTATGCAGATGCACTTCTTGTTATTCCAAAGTTGTTAGCTCAAAACTCAGGCTTTGATCCTCAGGAGACGATTGTGAAGCTTCAGGAGGAGTATGCCGAGTCCAAGACGCCAGTCGGTATTGATCTTTCCAGCGGAGAAGCATTAGTGCCTGCAGATAGTGGTATCTGGGATAATTATCGAGTCAAGAGACAGCTTTTGCATTCCTGTACTGTTATTGCAAGCAATCTTCTGTTGGTGGATGAGATTATGAGAGCTGGCATGTCATCTCTTAAGGGTTGAGACCAGAAATGAAAGAACATTTCCCTCGACGTTTGATGAATCGCTCTGATGTTTTCTCTTGTGGACAGTGTTGGCCTTAACGTAGTTTACTCTGTTAACACTCTAGAGTGCTTGTATTATACCGGGGTCACCTTTAAATCTGCTTTAACATGAAATGCTCTATGCACCTTGTTTGTGTTTCAATTTCGCAACCACTTGACGGAATTGTTAGACCGTTTTCAAGGCACAATTTTCCACTTCGTATTTTGACTCTGAAGTTTGCGGCTGAAGTTTTTGTATTCAGTGAAGCCTTACATGCGAATGATTATGGTTTGGGTCCCCCCTTTTGACCAGCTTGACTCGCTGCACATCATGAAAAGACCGAGTAACGGaataggccatttccgagttcccctctgtctctctttcaaagcgaggctaattgcgaaaccttttgttatgataattaatttcaatttcaatatgaatgggaactgattttctgaacaaagactttgcacttagcctcgctttgaagtgaaggctgaggtgaactcggaaatagcctattATTAATGCTTCGACCGCGTGAAGAACGGGACTAGAGAATCATAAGAGAGCGACAAGGTATCTGGGTGGTTTCAAAAATAAGGAGTTTCCTTCCTTCTCTTGTCTCTTGTCACGTGTGCATGGGCTTTTATCACACGGCTGCCATGTTGAGGTCCGAGGGACCGAAAAATTTTATATTGTATCCCTTGAAATCGTTCCCATGCATGTCAACTCGAGGCTCAGGGTACGAAATCTGTGTTCTCTTACCGACATGCCGCCGGTCAATGGCCTGGTTGTTCTCTACATTTTTTTACACGTGAAGGACGATTTTCTTTTTCAGAGGCTGATTTCTTGCACCTGTCAGTCCTTTCTTATATCATGTTATTCGAgttaccgtaaagttccgaaaatacgcccctccaaatataagcccctcaaactctcatcacaaaaaactttccgttaaatcgcccctccgaatgtaagtccccgagggatcacactttgaaactgatacaaaataaaacaaagcaataata

Protein

Uniprot

Uniprot term	Description
P80317	T-complex protein 1 subunit zeta OS=Mus musculus OX=10090 GN=Cct6a PE=1 SV=3
Q3MHL7	T-complex protein 1 subunit zeta OS=Bos taurus OX=9913 GN=CCT6A PE=1 SV=3
P40227	T-complex protein 1 subunit zeta OS=Homo sapiens OX=9606 GN=CCT6A PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027409	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR027413	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan
IPR017998	Family	Chaperone tailless complex polypeptide 1 (TCP-1)	Interproscan
IPR002423	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR027410	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11353	CHAPERONIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005832	Cellular Component	chaperonin-containing T-complex	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan