Gene detail

Detailed information of amur_s0178.g36.t1 in Acropora muricata

Genomic Location: sc0000178_pilon:534745...540952
NR annotation: XP_044178621.1, rac guanine nucleotide exchange factor B-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9TS87	Transgelin OS=Bos taurus OX=9913 GN=TAGLN PE=1 SV=4
P37804	Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3
P19966	Transgelin OS=Gallus gallus OX=9031 GN=TAGLN PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR050606	Family	Calponin-like	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR003096	Family	Smooth muscle protein/calponin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47385	CALPONIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0015629	Cellular Component	actin cytoskeleton	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20526	TAGLN; transgelin	-	Membrane trafficking	ko04131	deepkoala