Detailed information of amur_s0255.g19.t1 in Acropora muricata

Genomic Location: sc0000255_pilon:413236...429305
NR annotation: XP_015753903.1, PREDICTED: nuclear cap-binding protein subunit 1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6GQD0Nuclear cap-binding protein subunit 1-B OS=Xenopus laevis OX=8355 GN=ncbp1-b PE=2 SV=1
Q6GQ80Nuclear cap-binding protein subunit 1-A OS=Xenopus laevis OX=8355 GN=ncbp1-a PE=2 SV=1
C0H906Nuclear cap-binding protein subunit 1 OS=Salmo salar OX=8030 GN=ncbp1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02854MIF4GMIF4G domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027159FamilyNuclear cap-binding protein subunit 1Interproscan
IPR003890DomainMIF4G-like, type 3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12412CAP BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0000339Molecular FunctionRNA cap bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005845Cellular Componentobsolete mRNA cap binding complexInterproscan
GO:0005846Cellular Componentnuclear cap binding complexInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP