Gene detail

Detailed information of amur_s0270.g1.t1 in Acropora muricata

Genomic Location: sc0000270_pilon:15796...25541
NR annotation: XP_048575396.1, uncharacterized protein LOC125557126 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amur_s0270.g1.t1

GTCCGCCAAATGCGTTCGTACTTGCGGCGGGAAAGCATTTCTGCTGACCTCTTCGTCTTCGCAAAAACTACCTGGTAACAACTGATTGATACTCCAATTTTTTCGAAGTGGACCGACTGTACTCAAAGTCGAGTTCGGAAGTTATTACCAAGATGAAAGCACATATCGGTAGATATGGCATACCCAACAAGCTTATGTCAGACAATGGCCCAAACTTTACAAGCAGAGAGTTCAAGCTATTTACTGACAGCTACAACATTGAGCATATTACTAGTTCACCAACATACGCTCAATCAAATGATAAGGCGGAGAATAGTGTGAAAACAGCCAAGAAGATCATGCAGAAAGCACTTGATGCTCACGCTGACCCATACCTAGCATTTCTAGACTTCAGGAATACTCCGACGGGAGGTTACACAACCTCACCGGCACAGCGAATCATCAACCGAAGAACAAGGACACTACAGCCAGTGTCCAACAGATTACTTGATTCAGAGATAAATACAGGAGTGTACAAATCACAGAAAGCTAATCAAGCCAAACAAGCATTCTACCATGACAAGACAGCCAAAGATCTGAAACCCCTATCAGATGGTGATGTGCTCCCTAAATTGGGTACAAGCGATCATTACACTATCTCCATTGTTCCATCTATGTGTGCACCGATTAAGAATACCAACTCTGTAATCTGGAGGCGTGATTTAAGGCCTAGCAGGATACGTGAGTTTGGGTCCTGGATCACTCAACAATCCTGGCAGTCAGTGTTCGATCAGTCCTTAATACGTGATAAGTATGAGGCCTTTACTGATTTACTTATCACTGCAATTGACATTTATCTCCCAATGAGGAGGATTAAGCAAGCCGCGGCTGATAAAGCCTGGATTACAGTCAAGTTGAAATCCTTGATCGCTCGTCGTCAGGCTGCCCTGCATCGTTTTGGAAAGGAGTCTGACGTATTTAAGCGTTACCGTAACATTGTTCAGTATGAGTGTTCAATTGCTAAGAAATGCTACTACACAAACAAAGTAGCAGCTCCCAAGTCGACCAACATCAAACGGTGGTGGAGCAAAATAAAGAGCCTTCAAGGGGGTAGGGTCTCCTCTCCGTGGCATTTACAGTCGTTAAGTGACCAGTGCCCAGCTGTCGAGCACCTTGTGGAACAATTCAATCAGTTTCTTGGTTCTCTTACGGAGAGTTTTACCCCGCTGCCGCCTCCAGTACCAGGTCTTTTCTTCCCCAAGCCGAGCGAGTTCCTGAGCGATGACGTCACCGCCTTTAAAGCGCTTTGTGCGGTGAAGATTAACAAGTCGTCTGGTCCTGATCCCTTCCCTTGTAAAATCTGGAAGGAATCCGCTGTGGAACTTGCGCCGGTAGTACGCGATATTTATAACGCGTCTCTTGTACAGGGTTTTATTCCCTCCCAGTTAAAGCAAAGCATAATTTCACCACTCCCCAAGTGCAGTCCACCTAAGGATATCAAGGCTGATCTTCGCCCTATTGCGCTCACATCACAATTCTCAAAAGTTCTCGAAGGCTTTACGTGCAGATCCTTGTACGATCACGTGGTCGATCTCATTGATGATAAGTGGTTCGCTTTGGCTGGTAAATCAACAACACACGCACTTGTCTATTTCTTGCATGTCATCCATGAAGGTCTTGACCGGGGAGATATGTATGCAAGGGTGTTGTTTACTGACTTCTCCAAAGGGTTTGACCCGGTTGACCACCATGCTCTGTTACACGAACTTGGAATCTTAGGTGTCCATCACTGTCTCATCCGATGGATTAAAGCCTTCCTGTGTGACCGTCAACAAAGGGTTAGAATAGATGGTATACTCTCGCCTTCTATCCCACCGCGCGGAGGAATTCCCCAAGGAACTCGATTGGCACCCTTGCTGTTTGCGGTGTTGGTTAATAGGCTAGCGGAAGATTGGAGTACCAGGTTGAAGTACGTAGATGATGCCACTGTTATCGAACTCATCCCTCGAAATTCGCCTAGCTATTTGCCAATCGTTGCCTCTGATATAAACAAGTTCTCATCTCACCGTAACATGAGGCTAAACGCCAAAAAATcggacggcgctcagtcctgtatgtgcttgccccttggaagccaaagagaataaaaactagttaagctttcccattggttatttttacagtgaccttaccaaactgtcaacaataaatttaataattggcg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47510	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan