Detailed information of amur_s0326.g18.t1 in Acropora muricata

Genomic Location: sc0000326_pilon:262782...265245
NR annotation: XP_015773481.1, PREDICTED: small nuclear ribonucleoprotein G-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3ZBL0Small nuclear ribonucleoprotein G OS=Bos taurus OX=9913 GN=SNRPG PE=3 SV=1
P62308Small nuclear ribonucleoprotein G OS=Homo sapiens OX=9606 GN=SNRPG PE=1 SV=1
P62309Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423LSMLSM domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044641FamilySm-like protein Lsm7/SmGInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR034098FamilySmall nuclear ribonucleoprotein GInterproscan
IPR047575DomainSm domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10553SMALL NUCLEAR RIBONUCLEOPROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005682Cellular ComponentU5 snRNPInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0005687Cellular ComponentU4 snRNPInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0034719Cellular ComponentSMN-Sm protein complexInterproscan
GO:0043186Cellular ComponentP granuleInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0097526Cellular Componentspliceosomal tri-snRNP complexInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11099SNRPG, SMG; small nuclear ribonucleoprotein G-DNA replication proteinsko03032deepkoala

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