Gene detail

Detailed information of amur_s0344.g5.t1 in Acropora muricata

Genomic Location: sc0000344_pilon:151877...159945
NR annotation: XP_015774245.1, PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amur_s0344.g5.t1

CGCCACGTTGAAGGCAAGTCCGAGCGCTTTGGTATATTCCATTGAATGCGAGGGCTCTCCTGAAGAAGATGTCGTGGGTTTTGTTCTTGGGAGGTATGGCTTATATGTGCTTCTTAGTTGAAGCTGGTGAACAAGATGCTTTAGTAACGAAAAAGGTTTTTTTCGATATTTCAATCGGCGACAAGCCAACTGGAAGAATTGTCATTGGATTATTCGGCAAGGCTGTTCCAAAAACAGTTGATAACTTTGTCCAGCTCTCAACCCACGAGAAAGGCTTTGGGTTTAAAGGCAGTATCTTTCACCGAGTTATCAAGGACTTTATGATTCAAGGTGGGGACTTCACCAACCGAGATGGTACTGGAGGTAAGAGCATTTATGGTGATCGTTTCAAAGATGAAAATTTTAAGCTGCAACATTATGGGCCTGGTTGGCTGAGTATGGCAAATGCAGGAAAAGATACAAATGGTTCACAGTTCTTTATAACAACGGTAAAAACATCTTGGCTGGATGGTAGACATGTAGTATTTGGAAAAGTGCTAGAAGGAATGGATGTTGTGAAGAAAATAGAGAAAACACCAACTGATCAGCGAGATAAACCAAAGGAAGATGTTCAAGTAGTAGACTGTGGTTCCCTTCCAGTTGATAAGCCATTTTTAATTAAAGCTGAATAAAAATTTGGATTTGGCAATAAAACTAGAATGTCCTTTATCTTCGTTAAAGAAAATCATGGTAACAGAATATAAAAATAATATCTGGATTGTTATGTTTTTTTAAAGGCCCATATATTTTCGGTGGCCCACAGGTGTCGCTGTCATAACAAAACTTGCGTCAACTTAAAACTAAGTCATGTCAAGTTACGGCCGAACTCAACCACGGTAAAACACCCAAACCCACAGTGAAACAAACCCAACTCGCGGCAAAATGAGCTATCTCTAAAACAGAGAACGGGGAATCTTTGGAAACGGAAACGTCGTTTGTTGTAATATTGATAAGTGAACTGAAGTGTACGTTACATTACAGTTTGTTGTAATAGCTATAAATGGTTACTTAGCTCTTATTAACCGAACAGGAGggccatataataaTTATGAATATTATGTGTACTTTTGGAAACTTCTAGTCTTTCTTCAGATAGCTATATAAGCCACTCTCTAGTCAGCTGTAGTTAGTTGTTGTTGTGATTCGGGACTTCGGTCCCTGTTTGTGATTTTCGAGTGATATTGCCTGACGTGTGAAGGGATTTTCCCGTTCATGATTCTGGCATTCTGCTGTCAGGTTTGCAGTTGGTTTCTGTAGATTGCGATATTGTGAAACAAGTCGTCAGGAGGTTTCGTGAAAGAAAGAGACTACTTTGCCTATGGTCAGATAAGCGTAGAGAAGTGTTGAGTTGATTGATTGCAGTGAAATTGTACTAAGAGTAGTCGCTCGCGCGCTAAAGCCCGGTTTCCAAATAATTATAGTGAAATACAGCGGGCACCCTCTATTTAGCGGACACTAAGCCGGGTCCCGAAATTAATGTCTTATATTTCCCTTTAGAACGAACCCCTATTTAGCGGACACCTATTCAGCGAACGCGGACACTAAAATAAATTGTATTTGGCTATAAATTGTATCTGGCTACTGTATTTGTATTTGGTATTGTATTTGGCTGTTGTATTTTGGCTATACTAATTTCTATTGTTAAAAACCTCTATTAAGCGGACACCGGACTGAGTTAACAATGTACTGTAGTAATATATTGGATCATCACTTCCTTGAAATAGTGTAGTCGATTGACAAAGTTAGCTCTCAATAAACTGTCGATTAGACCGATATCCGGGAGGTTGATTATCAACCACGATCAAAGTTCACCTAAAGGCCTTGCACAAAGTACAGCACAGCTATTCGCAATCAAATCCTTCTTTGGCTAATTTTTTCTTAAGCCACTCACATGAAAAATTTATCACCATAACAGAAGTATTCACAGGGAAGCGCTAAGCCATACCCGTTTGACGTTTGCCTCTGTTTGCTGTTTTCCCCGTAAATGTTATCTTGCCAGAATTTGTCGGTCTCTTCAAACACTTTGTCACGTGTAGTGCCGTTAGCTCAGGAAGATGCCCAACCACTTCTTCGTGTCCGGAGTCAAACTCGTTGGGGTGTTTGAGTGGTTTTGTGTTCAAGAATTCTTATTTCCTCGCCTTTGTGTCACCTACATCATCACTTTCCACTGCGACTGCATTAGAGT

Protein

Uniprot

Uniprot term	Description
P24367	Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus OX=9031 GN=PPIB PE=2 SV=1
P24368	Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3
P80311	Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus OX=9913 GN=PPIB PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00160	Pro_isomerase	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024936	Family	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	Interproscan
IPR020892	Conserved_site	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	Interproscan
IPR002130	Domain	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR029000	Homologous_superfamily	Cyclophilin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0000413	Biological Process	protein peptidyl-prolyl isomerization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03768	PPIB, ppiB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B)	EC:5.2.1.8	Chaperones and folding catalysts	ko03110	deepkoala