Detailed information of amur_s0366.g3.t1 in Acropora muricata

Genomic Location: sc0000366_pilon:81040...133995
NR annotation: XP_029209684.2, nucleotide-binding oligomerization domain-containing protein 1-like [Acropora millepora]
Species Acropora muricata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C6FG12Protein NLRC5 OS=Ictalurus punctatus OX=7998 GN=nlrc5 PE=2 SV=1
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
C3VPR6Protein NLRC5 OS=Mus musculus OX=10090 GN=Nlrc5 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729
all species →		NACHTNACHT domainDomainInterproscan
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF17776
all species →		NLRC4_HD2NLRC4 helical domain HD2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR051261
all species →		FamilyNOD-like receptor (NLR)Interproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR041267
all species →		DomainNACHT, LRR and PYD domains-containing protein, helical domain HD2Interproscan
IPR038359
all species →		Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106
all species →		NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amur_s0366.g3.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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