Detailed information of amur_s0368.g1.t1 in Acropora muricata

Genomic Location: sc0000368_pilon:10835...38845
NR annotation: XP_029186683.2, uncharacterized protein LOC114954292 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9JM13Rab5 GDP/GTP exchange factor OS=Mus musculus OX=10090 GN=Rabgef1 PE=1 SV=1
Q9UJ41Rab5 GDP/GTP exchange factor OS=Homo sapiens OX=9606 GN=RABGEF1 PE=1 SV=3
O18973Rab5 GDP/GTP exchange factor OS=Bos taurus OX=9913 GN=RABGEF1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02204VPS9Vacuolar sorting protein 9 (VPS9) domainFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR003123DomainVPS9 domainInterproscan
IPR037191Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34718PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan

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