Gene detail

Detailed information of amur_s0443.g3.t1 in Acropora muricata

Genomic Location: sc0000443_pilon:54356...69555
NR annotation: XP_044175073.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114952237 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

amur_s0443.g3.t1

ATGGTCTTTAAGGGAAGAATCGATTGTGATGCTAGAGCTCGTATCTATTATTTAAGTCATGTTCGAGGACTTTCAGTGCGTAAAGTGGCACATCTTTGTGGCGTTTCACGCAGTAGTGTTTTCAGAATCGCCCAAGAAGGTGGTGTAAACAGGCGGTCTCTAAGGCCGGCATCAAGAAAAGGGCGTCCAAGAAAGCTCACAGAGAGACAGAAGCGTTTAATTACTAGGAGCATTTTAACGCTGAGAATCGAGGAAGGGAACTTTTCCGCTGCACGCATTATGGAACATGCAGGAATCGACAATTCTGAAGTGTCGGTGAGGACAGTTACCAGATTCTTAAATGAAAAAGGCTATTACTATTTACAAGCACGAAAGAAAGGGCTTCTAAAGAGAGATGATCTGAAAACAAGGTTATCTTTTGCTAAATGGTGTAAGAAAGATTTACCTGAGAATTTTTGGACTGAACATTTATCATTCTTTTTGGACGGAACTGGATTTGCCTACAAATCAAATCCCTGTGAGCAAGCTCGCGCAACAAAGGGGAGGACATGGAGAAAGATATCAGAGGGACTTGCCTTGGGTTGTACTTCCAAGGGACGAAAAGAGGGAACTGGCGGGAAAGTGTTAAGACTCGTGGTGGCCATCAGTTACGGTAAAGtcttcactcataactcggttgttgtgaagttgctgagagcagagtacaacagacgagctcaattgaggcctctgttctgggtcaatacgatgcagttgccgcttgaaaaggtctacacaagattgaaaattgtctcaagacggagaggaggtaatcagggggaaaccaaacgctcgagtgatgtaatctgggccaaagactcccggcgagatgaggtttggccggaagcacatgataataaggcgaatccatgcgatgtctttcgtacgttaaaggaaaataaggacatcatgacaattgtagagggaagtccaggaatcggtaaaacaactttctgtcttaaacttgcctatgactgggcaaatcaaagcagctctgcagcaagttttccagagttcgaactagttttgctgttaaaatgtcgagatattgatggagatctaacggaagccatctcggaacaactttttccaaaggatatgagcaaagataccagggaagagctcttttgtttcttggaggatattgaaaatcaggagagagtcttaattattttggacggcttggacgagctagcagaaaaatcgacgcatcacgtgaaagatcttctccacagaaaaaggtgggcttgctgctatgtgttgaccagtacgcgacaagagaaaggaattgaagtccgactacagcctgggtttgtgtttaatttatttctacaaattgaagggttcactgcagaggactcatttgagtacatcaggagacatttcaagattgctggcccagagcactcatccaaggggcagaagctcatagaagaaatagaaaaaaattcactcctgcaagacctgcgaacaaatccattaaatttgcttcttctttgtgtggtttatgaagatcatgaaggggagctgccatcatcccgtactgatctctaccatgtaattgttctgtgtcttttgagaagatattgcgctaaaaacaatgtggaggccaggaaaaaggacaaggacttggagacacaatttgaaagggacatccgttgtcttgggaagctggcctggaattgcctgcggagcgatcgccacagtttctttgaagaggagttggaagaattggaaagtagaaatgagaacttggttgtccgtgaactgggctttgtgtataaggaagaaagtttgaagcgattgaagccagaacatgaatactgctttttacacaagtcgtttgaagagtatctggctgcttcatacattgcgcataagttacgaagaaacgagttcaatgtatttgagcatttgaactttgatgctgtggtagagaaattccctcaggtgtttgtatttgtttctggaatacttcgtgaggagggaagtattctgtttgcacagattggtaagaagctaaagagtgactgggactggctccaatgcagttgggcagcagcagatttcttcattgatagctggagtgaaagtggaaacgctgaaggaatggcaaatactctttgttcattcataccttttccacggttcgtaggcttgttttgccctcacggtcccgtaactcagtacgagaacctgatggaggttttattgttctgcagaagattttccacggtggaggcacctgaggaaattcagctcaacgagccttcttcaatctctctagtcacctttatgaatattgggagagacttcgcatctcttccaaatttaaaatctctggatatttccaaccttaactcttatcatgggcttttgaggagtcttcccgatgttgtttgtttaacggaattggtgctaccagttatacgtcaaatactacttacacctgaagagaatgactgggacactgttgctgaggctctgacagcgagcaagaccttagagaaagtggcatgtactttggtaggagagaggggtgatgactgggccagggcccttggttctggattgcgtgctgatacaccactatcttcggtcagtcttacaatatatggcggaatgaatgaaactgcgttacaagctttagagtgtctcttattaaacaaatctctatcctctgtgtctgttattgtaaagggagatatgccaaactctcttactgtcaccatagcaagatgtcttacaggccaatctgctgtcaagtccccggagttgcgtgttagtggaaagctgagttcctgttgtgctaatctgatagagcgaggtatcatcaaaaataactcacttagtaactttgtattgtgtcttcatggagatcttcctgatagctggcaggcgattgcggagaatctaaatgtacaattggctgagaaatcaaccgttacctttgaaatctacccaaacactttcagccaagtcacagccactcagttgacagattttcgttcttgtgtgatcaagtatggattgtttgaacaagaaagtgtcactctaaacgtttggggtgagttaactattgatggtgcagaagttttatatgacgtcttaccatgcacctgggtatgtcacctgacgttaaatatccatggaaaattaaccgatgactttcttcactgcacagcaagacatgttgataagcagaaatcgttgtgccctataaccatcaatacttggaaccaattgagcaatgaggggaaagctcttttcaaagaacttgaattggacaagaatccagctgttaccttaaatgtgtgtgaggtgcacgtaccttcagatgaatcgggcgatgacaaaattgtatctgttgacaatgctgcatctctcattacgcttttagaggaagcggaaaataccggaaaagaaaaccttacagttacaatcaatgttcagagtgatgactctacttgtgacgacagtgatgactctTCATGTGGTGACAGTGATGACTCTATTGGCCGCAgctggaacgatattctgctccttgctgcttggaaagttgcatctcactga

Transcript

amur_s0443.g3.t1

gtttagtcaacttttgttgttcaaaaaatactttgaattctctcccttaaaaaaagatagatgtcgtgaaagttatgttgctaggatctttcaatgactgtcttacttggacaccttcacagagacctctacaacaccagatcaagctgttgaagcagttaacttggttgagcaagaacctagttcagtcttagaatcagtttcctatcttgatgcgacaacaatacagcatattgtgagtgatgcagtgagccaaggcagagaaaatgtaacgcacagggaaagacccaggacacatcccttgaccacaactgaaagaagagagcgactaaatgcaggcatccctgaaagaattcaaggcaatcaacgtacaacaaccacacgagtgggtgaacaggattcagcattgacaagaaaacacctggaaacttctttgttatatgatgcatatgtagaacctagccaagtttcatcagacggacgatctgtcctgaaacaggggaggagatcgttgcatttacatccgagagccctgccaccggtcaaggaacaaagacgtgatacagacatccatcgagAATAAGTCCTGGTGATAAAGTAGAGGATTATAAATACGCCGCAACCGGTGGCTATAGCAATTTCTACAGTAACATTTGCTTCAAACAAAATGGTCTTTAAGGGAAGAATCGATTGTGATGCTAGAGCTCGTATCTATTATTTAAGTCATGTTCGAGGACTTTCAGTGCGTAAAGTGGCACATCTTTGTGGCGTTTCACGCAGTAGTGTTTTCAGAATCGCCCAAGAAGGTGGTGTAAACAGGCGGTCTCTAAGGCCGGCATCAAGAAAAGGGCGTCCAAGAAAGCTCACAGAGAGACAGAAGCGTTTAATTACTAGGAGCATTTTAACGCTGAGAATCGAGGAAGGGAACTTTTCCGCTGCACGCATTATGGAACATGCAGGAATCGACAATTCTGAAGTGTCGGTGAGGACAGTTACCAGATTCTTAAATGAAAAAGGCTATTACTATTTACAAGCACGAAAGAAAGGGCTTCTAAAGAGAGATGATCTGAAAACAAGGTTATCTTTTGCTAAATGGTGTAAGAAAGATTTACCTGAGAATTTTTGGACTGAACATTTATCATTCTTTTTGGACGGAACTGGATTTGCCTACAAATCAAATCCCTGTGAGCAAGCTCGCGCAACAAAGGGGAGGACATGGAGAAAGATATCAGAGGGACTTGCCTTGGGTTGTACTTCCAAGGGACGAAAAGAGGGAACTGGCGGGAAAGTGTTAAGACTCGTGGTGGCCATCAGTTACGGTAAAGtcttcactcataactcggttgttgtgaagttgctgagagcagagtacaacagacgagctcaattgaggcctctgttctgggtcaatacgatgcagttgccgcttgaaaaggtctacacaagattgaaaattgtctcaagacggagaggaggtaatcagggggaaaccaaacgctcgagtgatgtaatctgggccaaagactcccggcgagatgaggtttggccggaagcacatgataataaggcgaatccatgcgatgtctttcgtacgttaaaggaaaataaggacatcatgacaattgtagagggaagtccaggaatcggtaaaacaactttctgtcttaaacttgcctatgactgggcaaatcaaagcagctctgcagcaagttttccagagttcgaactagttttgctgttaaaatgtcgagatattgatggagatctaacggaagccatctcggaacaactttttccaaaggatatgagcaaagataccagggaagagctcttttgtttcttggaggatattgaaaatcaggagagagtcttaattattttggacggcttggacgagctagcagaaaaatcgacgcatcacgtgaaagatcttctccacagaaaaaggtgggcttgctgctatgtgttgaccagtacgcgacaagagaaaggaattgaagtccgactacagcctgggtttgtgtttaatttatttctacaaattgaagggttcactgcagaggactcatttgagtacatcaggagacatttcaagattgctggcccagagcactcatccaaggggcagaagctcatagaagaaatagaaaaaaattcactcctgcaagacctgcgaacaaatccattaaatttgcttcttctttgtgtggtttatgaagatcatgaaggggagctgccatcatcccgtactgatctctaccatgtaattgttctgtgtcttttgagaagatattgcgctaaaaacaatgtggaggccaggaaaaaggacaaggacttggagacacaatttgaaagggacatccgttgtcttgggaagctggcctggaattgcctgcggagcgatcgccacagtttctttgaagaggagttggaagaattggaaagtagaaatgagaacttggttgtccgtgaactgggctttgtgtataaggaagaaagtttgaagcgattgaagccagaacatgaatactgctttttacacaagtcgtttgaagagtatctggctgcttcatacattgcgcataagttacgaagaaacgagttcaatgtatttgagcatttgaactttgatgctgtggtagagaaattccctcaggtgtttgtatttgtttctggaatacttcgtgaggagggaagtattctgtttgcacagattggtaagaagctaaagagtgactgggactggctccaatgcagttgggcagcagcagatttcttcattgatagctggagtgaaagtggaaacgctgaaggaatggcaaatactctttgttcattcataccttttccacggttcgtaggcttgttttgccctcacggtcccgtaactcagtacgagaacctgatggaggttttattgttctgcagaagattttccacggtggaggcacctgaggaaattcagctcaacgagccttcttcaatctctctagtcacctttatgaatattgggagagacttcgcatctcttccaaatttaaaatctctggatatttccaaccttaactcttatcatgggcttttgaggagtcttcccgatgttgtttgtttaacggaattggtgctaccagttatacgtcaaatactacttacacctgaagagaatgactgggacactgttgctgaggctctgacagcgagcaagaccttagagaaagtggcatgtactttggtaggagagaggggtgatgactgggccagggcccttggttctggattgcgtgctgatacaccactatcttcggtcagtcttacaatatatggcggaatgaatgaaactgcgttacaagctttagagtgtctcttattaaacaaatctctatcctctgtgtctgttattgtaaagggagatatgccaaactctcttactgtcaccatagcaagatgtcttacaggccaatctgctgtcaagtccccggagttgcgtgttagtggaaagctgagttcctgttgtgctaatctgatagagcgaggtatcatcaaaaataactcacttagtaactttgtattgtgtcttcatggagatcttcctgatagctggcaggcgattgcggagaatctaaatgtacaattggctgagaaatcaaccgttacctttgaaatctacccaaacactttcagccaagtcacagccactcagttgacagattttcgttcttgtgtgatcaagtatggattgtttgaacaagaaagtgtcactctaaacgtttggggtgagttaactattgatggtgcagaagttttatatgacgtcttaccatgcacctgggtatgtcacctgacgttaaatatccatggaaaattaaccgatgactttcttcactgcacagcaagacatgttgataagcagaaatcgttgtgccctataaccatcaatacttggaaccaattgagcaatgaggggaaagctcttttcaaagaacttgaattggacaagaatccagctgttaccttaaatgtgtgtgaggtgcacgtaccttcagatgaatcgggcgatgacaaaattgtatctgttgacaatgctgcatctctcattacgcttttagaggaagcggaaaataccggaaaagaaaaccttacagttacaatcaatgttcagagtgatgactctacttgtgacgacagtgatgactctTCATGTGGTGACAGTGATGACTCTATTGGCCGCAgctggaacgatattctgctccttgctgcttggaaagttgcatctcactgaagtcactcaatctgacattaaacggcgggtgcgata

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46844	SLR5058 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12800	NLRP3, PYPAF1; NACHT, LRR and PYD domains-containing protein 3	-	Pattern recognition receptors	ko04054	deepkoala