Gene detail

Detailed information of amur_s0593.g3.t1 in Acropora muricata

Genomic Location: sc0000593_pilon:71226...102340
NR annotation: XP_044182331.1, uncharacterized protein LOC122963091 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

amur_s0593.g3.t1

ATGCTCACAACCTTATTGACACCCAGCTTCAGTGAAACTGGGAGTAACAAAAGAAGATTTGAGAATGAGGTGTATGCAGTATTTACCAAGTACTTAAGGGAAGTAGCTAGTGGTCGAAGAAGTGCTGTTACGCTGGGCCATGTATTGCAGTTTTCCACTGGAACTGATGAAGAACCCATACTGGGTTTTGAGTTGCATCCTTCACTTATCTTTGAAGAAGTGTCTAATTCATTCATTCCCACAGCCAACACTTGCAGTAATACATTGTATCTGCCACATGCAAATGTGACTACACCACTTCCAGAATGAACTACCTCGAACCCAGACGTCTCTCAAAATCATGCAAATCACATGCGAAGGGCCTGTGCAGAAGGCCTAAGAACTGGTCAAACGAGtttgtcgtggggtataaagactgggtaccaaggcttggaaccggaagtgatgGTTCAAGAGCTTGATCTGGCTGTGGCATACAACAATGATAACACCATTCACCGGAAGATCAAGGCCGCAGCAAGAGCTCCTAAACTGGAAGCTCAGGTTAGATTCCTAGACAAAGAAGCGGAGCTGAAGAAGGTAACAATGATGAAAGAGCTAGCAATGGCAAAGGCTGAAAGGGATGCTATGAAGGCACTCGAAGACGACGTTCATTGCGAGACTTCGGTTCAAGACCCAAACCCAAGTTGTCAAGTACAAGGCAGTTTAAATCAAGCTGCTCCTCCTATCTTACCTAAGGAGACATTCACACCTCTTTCACTCCACGAACCTTCTTTATCCCTGAGAAGTAATTTACAGGAGGCCACACCTCTCAACCCCTTTAGTGCACTGCCAGCTGGATCATTTTGTCCGCCAGTAAAGAGTGAACACAAAGAGAATGATGCATCGAATCCTTTCACCCCAGCGACCTTGGGAAAACCTCCGCTACCTGTCAAGAGGGAAACTCAAGGAACTAGCGTGACAAATCCAAGTGCTTCGTCAATAGTAGAACCCCAAGTCAAGATTGCTGGCCTCAACTCAAGCCAAGTCGTCCTTCAGGAGATGATCAAGCTCCAAGCTAAGCAAACTGAGCTTAGCTTCCTTATTGCTGAACAAAAAAGAGTAGTTCTCTTCCTGTTCAAGAACCGCCAATGTTCAATGGTTAGAGTCTCTGAGGAGTTCCGAGATCTTCTGTGTTTCTTGTGGTGGGAGGACGGAGACACATCAAGGCCACTTATTGAGTTTAGGATGACAGTCCACCTGTTCGGGGCTACAAGTTCTCCAGGTTTTGCCAACACTGCGTTAAAAGCGGCCGCAGATGATAATGAAGAGAATCTTGGTTGTGCAGCAGCTGAATTTGTCCGAAGGGACTTTTATGTCGATGATGGCTTAAAGTCCGTTACATCAATACCTGACGCAATTCCCCTCATCGAAGATACCAAGGAACTGTGGCTTTCAACATCGAACTGGATCAAAGGGCCAGCTTTCCTTTGGAAAGATGAGGTTCATTGGTCAGCAACAGACAGTGAGGATTCCATCAAGTTGTCAGAAGATGATCCTGAAGTGAAGACGTCAGCATCCCTTGTGACAACTACAGACAAGCATTTTCCAAGCCTAGCCAGTCGTTTGGAGTATTCCTCTGACTTCCATAGAGCAAAGAAGGCTGTCGTGCTGTGTCGTTTTTACATAAGGAAACTCAGAGAAAGGATTGAGTGTAGAACCAGAGGTGAGGACCAGAAGTTCCCAGAGAAGATCCCACAGTCGGCAAGTTTTTCGCAACCAACACCATCAAGACACATCACCGTTGAGCTCATGCAGCAAGCAGAAATGACTATGATTAAATCGGTCCAGGAAGTACATTATGAAGAAGAAATAAAGGCTCTGAGATCTACACCACCAGGGTCAAGCTCCAATACTGTGAAGATGTCCAGTCCTCTCTTAAAACTGGACCCATTTTTCGACGCCAATGGCATCTTCAGGGTTGGTGGACGCTTAAAGTATGCTGAACTGCCAGAACGTGTAAAGTTCCCATTGATCCTGCCAGGAAAGAATCATGTTTCCCACCTCATCATCAAACGTTGCCACGAAGAAGTGGAACACCAAGGGAAAGGACCAAGCAAATCACAACTACAAAATTGCCATGGACCATCTGGCATCTTTGTGGGTGTTATAGCTACGGGGATTCAGGACCTGCTAACAACTGGCAAGACACACATGATTTGCATATACCTTCAACAACTTGATCCAGGCTCGGCCTCCACACCTTTGACCCTAGCCTCTGCTTACCTTTGA

Transcript

amur_s0593.g3.t1

TTTCTTACACATGCTCAAGAGTTTCTAGAAATACAGGTTTGTGAAGCCATGCCAATATTTCTTCACCTGTTTTGACCAAGTGAAGCCAGTGTTTAAAGTGTGAAAATGCTCACAACCTTATTGACACCCAGCTTCAGTGAAACTGGGAGTAACAAAAGAAGATTTGAGAATGAGGTGTATGCAGTATTTACCAAGTACTTAAGGGAAGTAGCTAGTGGTCGAAGAAGTGCTGTTACGCTGGGCCATGTATTGCAGTTTTCCACTGGAACTGATGAAGAACCCATACTGGGTTTTGAGTTGCATCCTTCACTTATCTTTGAAGAAGTGTCTAATTCATTCATTCCCACAGCCAACACTTGCAGTAATACATTGTATCTGCCACATGCAAATGTGACTACACCACTTCCAGAATGAACTACCTCGAACCCAGACGTCTCTCAAAATCATGCAAATCACATGCGAAGGGCCTGTGCAGAAGGCCTAAGAACTGGTCAAACGAGtttgtcgtggggtataaagactgggtaccaaggcttggaaccggaagtgatgGTTCAAGAGCTTGATCTGGCTGTGGCATACAACAATGATAACACCATTCACCGGAAGATCAAGGCCGCAGCAAGAGCTCCTAAACTGGAAGCTCAGGTTAGATTCCTAGACAAAGAAGCGGAGCTGAAGAAGGTAACAATGATGAAAGAGCTAGCAATGGCAAAGGCTGAAAGGGATGCTATGAAGGCACTCGAAGACGACGTTCATTGCGAGACTTCGGTTCAAGACCCAAACCCAAGTTGTCAAGTACAAGGCAGTTTAAATCAAGCTGCTCCTCCTATCTTACCTAAGGAGACATTCACACCTCTTTCACTCCACGAACCTTCTTTATCCCTGAGAAGTAATTTACAGGAGGCCACACCTCTCAACCCCTTTAGTGCACTGCCAGCTGGATCATTTTGTCCGCCAGTAAAGAGTGAACACAAAGAGAATGATGCATCGAATCCTTTCACCCCAGCGACCTTGGGAAAACCTCCGCTACCTGTCAAGAGGGAAACTCAAGGAACTAGCGTGACAAATCCAAGTGCTTCGTCAATAGTAGAACCCCAAGTCAAGATTGCTGGCCTCAACTCAAGCCAAGTCGTCCTTCAGGAGATGATCAAGCTCCAAGCTAAGCAAACTGAGCTTAGCTTCCTTATTGCTGAACAAAAAAGAGTAGTTCTCTTCCTGTTCAAGAACCGCCAATGTTCAATGGTTAGAGTCTCTGAGGAGTTCCGAGATCTTCTGTGTTTCTTGTGGTGGGAGGACGGAGACACATCAAGGCCACTTATTGAGTTTAGGATGACAGTCCACCTGTTCGGGGCTACAAGTTCTCCAGGTTTTGCCAACACTGCGTTAAAAGCGGCCGCAGATGATAATGAAGAGAATCTTGGTTGTGCAGCAGCTGAATTTGTCCGAAGGGACTTTTATGTCGATGATGGCTTAAAGTCCGTTACATCAATACCTGACGCAATTCCCCTCATCGAAGATACCAAGGAACTGTGGCTTTCAACATCGAACTGGATCAAAGGGCCAGCTTTCCTTTGGAAAGATGAGGTTCATTGGTCAGCAACAGACAGTGAGGATTCCATCAAGTTGTCAGAAGATGATCCTGAAGTGAAGACGTCAGCATCCCTTGTGACAACTACAGACAAGCATTTTCCAAGCCTAGCCAGTCGTTTGGAGTATTCCTCTGACTTCCATAGAGCAAAGAAGGCTGTCGTGCTGTGTCGTTTTTACATAAGGAAACTCAGAGAAAGGATTGAGTGTAGAACCAGAGGTGAGGACCAGAAGTTCCCAGAGAAGATCCCACAGTCGGCAAGTTTTTCGCAACCAACACCATCAAGACACATCACCGTTGAGCTCATGCAGCAAGCAGAAATGACTATGATTAAATCGGTCCAGGAAGTACATTATGAAGAAGAAATAAAGGCTCTGAGATCTACACCACCAGGGTCAAGCTCCAATACTGTGAAGATGTCCAGTCCTCTCTTAAAACTGGACCCATTTTTCGACGCCAATGGCATCTTCAGGGTTGGTGGACGCTTAAAGTATGCTGAACTGCCAGAACGTGTAAAGTTCCCATTGATCCTGCCAGGAAAGAATCATGTTTCCCACCTCATCATCAAACGTTGCCACGAAGAAGTGGAACACCAAGGGAAAGGACCAAGCAAATCACAACTACAAAATTGCCATGGACCATCTGGCATCTTTGTGGGTGTTATAGCTACGGGGATTCAGGACCTGCTAACAACTGGCAAGACACACATGATTTGCATATACCTTCAACAACTTGATCCAGGCTCGGCCTCCACACCTTTGACCCTAGCCTCTGCTTACCTTTGAAGATCCCTTGGTGACCTTTGTGTGTTAGTTCTAGCACTTTGCCTCTAAGACTTGAAGCATAGCCAAATCTGCCTTTTGGGAATAGAACTGGAAATGCAAGCTCTTCACACAGTTTATCATTCATTAAAGAGACTGGGTGCTTGTTTTCACCAGgagtattaTaccagatctttcgggagG

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569	Domain	HECT domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan