Detailed information of amur_s0739.g2.t1 in Acropora muricata

Genomic Location: sc0000739_pilon:51876...84146
NR annotation: XP_015750785.1, PREDICTED: uncharacterized protein LOC107330734 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9DGN1Cohesin subunit SA-1 OS=Xenopus laevis OX=8355 GN=stag1 PE=1 SV=1
Q8WVM7Cohesin subunit SA-1 OS=Homo sapiens OX=9606 GN=STAG1 PE=1 SV=3
Q9D3E6Cohesin subunit SA-1 OS=Mus musculus OX=10090 GN=Stag1 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21581SCDStromalin conservative domainRepeatInterproscan
PF08514STAGSTAG domain RepeatInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF04434SWIMSWIM zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020839DomainStromalin conservative domainInterproscan
IPR013721DomainSTAGInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan

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