Gene detail

Detailed information of amur_s0741.g2.t1 in Acropora muricata

Genomic Location: sc0000741_pilon:23786...38380
NR annotation: XP_015777626.1, PREDICTED: receptor-type tyrosine-protein phosphatase F-like isoform X18 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amur_s0741.g2.t1

GTTGTTACTAATTACGATTTTAACTGTTTCTGCGGTCGTGACCTCACCAGTGCTGAAGGGTTGTCGTTTCCGCTCCGGGGAGGGGTAAGGAATCGAATACGAAATTTCGATCTTATTGTTACGGAAGCTTGTGCGGCCCGATCATGGGCGAAAATTTTGCGAAGAGAATCGACCATTTGTCAAATCTTCGACGCTGGTTTCCTATCCTTTTGCTGGTGACACTGTGTCCCTGTGATGAAGCAGTTGTACCAGAGGTGACAATTGAAGagccaagtgctcctccttctaatgtcagtgcacatagtgagaactctaccagtgttttcgtcagctggggagacgtccctttttcagatcaaaatggtgttatagtgttttacacagtcacctacacagctttacctagtggtcttacaaaaacaaaagttgtgactacgtctgcaaatcaagccacactgactggtctcaacgaatacacttactacagcatcacagtgtttgcgtcaacgtcaaagggaggaggaattcaaagtacacctattgtggtcatcacagatgaagacaagccaaatgctccccctgcgagtgtcaccggacataatgcaagctctaccagtatttttgtcagctggggacaagtcccttttcttgatcaaaatggtgttatcttgagttatacagttacctacagagcgttacctagggggtcttcacaaacaaagaatgtgactgcgccatcaaatcaaaccacagtgaccagtctcggcgaatacactaactacagcatcacagtgtttgcgtcaacatcaaagggaggtggaaatccaagtacacctattgtgatcatcacagatgaagacaGGCCTGATGGATGGCCTGTTATAACTGGTTTAACAGCTCTTGACAGCACAACCTTCATGGTTTCGTGGAGACGTGTTCCTGTAAATCTTAGAAATGGTGTTATTACTCGATACATCATATCGTACAAGGATGAAGAAAATGAAAAAACAGAATATAAAAGCATTCCAGCACCTGCCTTAGAAGCAGTTATCACAGGTCTGAGGCAGAAGGTCAGATATTCATTCAAGATTCGGGCTGCCACTTCGAAGGGTGAAGGACCTTTTAGTGGTGCTAACGTGACTGAAACTGAAGTTGTAGCCGGACGACTCCTAGTTCACTATTCTGCAAATATTGCGTAAGAATGAATAGTGTATAGATTTTGATTTCTGTGGAATATGTTTTAGGGAATCGTCGTTATAAAAAGAGCGATGCTTGCTGCTCAAAGAAAGAATACTCAAGACTCAGGAGCGCTTCAAATTGGAATTATTACTTAGCACGCTGAATTAATGCCTTTTTCCCTTGCTCTTTTTCACAACGAACAGAAAGCCTGATTAACTTACTTAAACTTAACTTAGATATCCTTTCTTTTAGCGTTATGAGGTGTTTCTCGAGTTGTTCGTCAGTATCATTACACTGGTTGACCTGACGTTGGTTCCCTTGATACTGGCACTGGACTGAGCGATCTCATTGGTCAGGTTCAAGGGTGGCAACAGCCATCCGGGAACAGTACAATCGTTGTTCGTTGCTTGTTCCCCCTTACCCACCCCTTCTGATGACTCCACGGAACATGTAAATGCGAAAATgcaaacaaActtactctaaatatgaccaaaacCgaattctggtcaaattGctgcttcccctcaatcttcaggaacggTactcgggtGaaacaggtTgcaactacgaaatcacttggtataacaattgatgacaaccacagctggaattgccacattgaaaaactaaccaaaacatcgcttttggaatcgGtgccatgaaatgtgttaggcacctggttcctccgccgaccttacatcttatataccaagctttaatacaacctcactttgactactgtactactgtttggggaacctgtggggttactttacaagacaagctgcaaaaattgcagaatagagcaacccgcgttttaaccttctttaattatgaccttaatgctggccaattgctggaaatcctggggtggaaaaatcttgatcgcaaaaaacattcaaaggccaccgtggtattcaaatgcctgcatgggttatctctggactaaactttcgaaactttctgaacgaaatacaagctacaatttgagggactccggctgagaacaaacttaatgttagattgccacgtgcaaatagttttagttatagtggcgcgacactgtggaatcgccttccttatgaggctagCTCAGTTGAATTCTTTTTATTTTATTTTCTCCCTCTTTGAAAGTGCTGGTGTGAGTCAAACCGGCAGGAGTGTTCTGCTCTTTGAGTATTGTGATTGAGCGCTTGAAGAGTGAAGGTGTTGTGGATGTGTTCCAAACTATCATGGTTCAGAAAAAGGATTAATACGAATTTTTTTACCGCGCGCTGAAAGAGTACCTGGACTCTAGGATTCCTACAGCAATATTGAGGCAGTCAGTattgagattagaagaatagaaggtagataatagaacatagaTAGACAA

Protein

Uniprot

Uniprot term	Description
G5EF96	Netrin receptor unc-40 OS=Caenorhabditis elegans OX=6239 GN=unc-40 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan