Gene detail

Detailed information of amur_s1021.g2.t1 in Acropora muricata

Genomic Location: sc0001021_pilon:33896...50147
NR annotation: XP_029212066.2, hepatoma-derived growth factor-related protein 2-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7Z4V5	Hepatoma-derived growth factor-related protein 2 OS=Homo sapiens OX=9606 GN=HDGFL2 PE=1 SV=1
Q32N87	Hepatoma-derived growth factor-related protein 2 OS=Xenopus laevis OX=8355 GN=hdgfl2 PE=2 SV=1
Q6P4K1	Hepatoma-derived growth factor-related protein 2 OS=Xenopus tropicalis OX=8364 GN=hdgfl2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11467	LEDGF	Lens epithelium-derived growth factor (LEDGF)	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13176	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021567	Domain	Lens epithelium-derived growth factor, integrase-binding domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR036218	Homologous_superfamily	HIV integrase-binding domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR052699	Family	Regulatory & Mitotic Spindle Associated	Interproscan
IPR035441	Homologous_superfamily	TFIIS/LEDGF domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10098	RAPSYN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15837	GPSM2; G-protein signaling modulator 2	-	Cilium and associated proteins	ko03037	deepkoala