Gene detail

Detailed information of amur_s1197.g2.t1 in Acropora muricata

Genomic Location: sc0001197_pilon:8696...18786
NR annotation: XP_015758767.1, PREDICTED: lactose-binding lectin l-2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P05140	Type-2 ice-structuring protein OS=Hemitripterus americanus OX=8094 PE=1 SV=2
Q02988	Lectin OS=Pleurodeles waltl OX=8319 GN=LEC PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF00229	TNF	TNF(Tumour Necrosis Factor) family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006052	Domain	Tumour necrosis factor domain	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR008983	Homologous_superfamily	Tumour necrosis factor-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005164	Molecular Function	tumor necrosis factor receptor binding	Interproscan
GO:0006955	Biological Process	immune response	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan