Gene detail

Detailed information of amur_s1555.g2.t1 in Acropora muricata

Genomic Location: sc0001555_pilon:14827...19300
NR annotation: XP_015780952.1, PREDICTED: high-affinity choline transporter 1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9VE46	High-affinity choline transporter 1 OS=Drosophila melanogaster OX=7227 GN=ChT PE=2 SV=2
Q8UWF0	High-affinity choline transporter 1 OS=Torpedo marmorata OX=7788 GN=CHT1 PE=2 SV=1
Q9JMD7	High affinity choline transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc5a7 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00474	SSF	Sodium:solute symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052244	Family	High-affinity choline transporter	Interproscan
IPR038377	Homologous_superfamily	Sodium/glucose symporter superfamily	Interproscan
IPR001734	Family	Sodium/solute symporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45897	HIGH-AFFINITY CHOLINE TRANSPORTER 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005307	Molecular Function	choline:sodium symporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008292	Biological Process	acetylcholine biosynthetic process	Interproscan
GO:0015871	Biological Process	choline transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan