Detailed information of amur_s1936.g1.t2 in Acropora muricata

Genomic Location: sc0001936_pilon:1...12646
NR annotation: XP_029200624.2, cleavage stimulation factor subunit 2-like isoform X2 [Acropora millepora]
Species Acropora muricata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P33240Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1
Q5RDA3Cleavage stimulation factor subunit 2 OS=Pongo abelii OX=9601 GN=CSTF2 PE=2 SV=1
Q8BIQ5Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007110 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14327
all species →
CSTF2_hingeHinge domain of cleavage stimulation factor subunit 2FamilyInterproscan
PF09777
all species →
OSTMP1Osteopetrosis-associated transmembrane protein 1 precursorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025742
all species →
DomainCleavage stimulation factor subunit 2, hinge domainInterproscan
IPR019172
all species →
FamilyOsteopetrosis-associated transmembrane protein 1 precursorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45735
all species →
CLEAVAGE STIMULATION FACTOR SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0005847
all species →
Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0098789
all species →
Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amur_s1936.g1.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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