Gene detail

Detailed information of anas_s0004.g164.t1 in Acropora nasuta

Genomic Location: sc0000004_pilon:2472974...2485038
NR annotation: XP_029204211.2, mitochondrial glutamate carrier 2-like [Acropora millepora]
Species abbreviation ANASU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

anas_s0004.g164.t1

atattcaatacatagcccattctgccttcggcctcatggactattgattcagagcccattcgggctcgagtaataatttataaataatcaccatttcccaaatctttaatttcaagtggcgttttcgttgcattgctgtcgttgctgctttagctccctaATATAGTATACTCTTTATAACTTTAAAAAACTGAATTTTTGGAAAGCAACATTACCGCTTCATTTAAACATTACTATATCTGAATTGACTTCTGGCCAATCTTTTCATCCACGTTCTTGCCATGGAATTGTTCTTCGAACTTTTGAATTAACAAGGATCGAGTTTTCAAACTAAAACGTACATTATTTAGCTCCCATGAATCATGCTTCGCAGTGGATCAAATCAAAAAGAGGGAAACGAGGGGTGTCTGGAAAACCCGAATAACGAACAGTTCCAAATAGTGGCTAAAAACAGGTGAAATTATGTTCAGAAAGACCTTTTGTCCTGATAAGGGTCTATGCTTTTTAGCGGGAAAGGCCAATTCCACGATGTTGCGATGTCTGTCCTGTTTGCTACGATTTTCCAATATTCGCCGCCATTCACCACTATATTCGAGACTATTCGTGCTATTCGCGACTATTCGTTGTTCGGGTTTTCCAGACACTCGGGAAACGAGACGAAAACAAATTAGCGCTATTCGCATTGACGGGACGAAGAAATCAGGAGTAATAGCGGGGCTTGACCGGTCTACCATTTTCGATCCTCTCCGTGCTCTCCGCCGCGGGGCCACGTTCTGAGTATCTCCCTAGCAAAGTACACTGAAAATAAAGTGTATCTAAAAATGTTAAAACATTTTATGACTTAAAATTATTAATAACAAAGTTATTGCAGGAAAAATGTGATTATGATCTACTTGATATGAATAGGTGAAAGAGCCTGGGCATTGTGACACTTCATTCTTAAGTTTACTGATCAAATTTTTTTTAGATTCAAGGTCTCAATGACACACTGTCAGGTTTTCGTGTTTCTTTCATGTCTATACTTGGATGTTGTTGAACTAAAAACGGTGACAACTTGAAACGTTTTGGAACTTGCTGGAGCCGTCGTAAATTTTTTCACGAAAGACTGATTTCAATTTCTTCGATAATTTTTGAATAATGATTTATTAATTATCAGTTGAGTAGAGAATCACTAAGTCTTTTGCCGTTAAACGTAAGTCTCGTTTCAGAAAGTAGCTGGGATAACGAGGAAATGATTCAATTGAGTTTTGCATGACGTTCATTGGTAACACTTTAAAATACTTTTGTAATGTGCTTTCAAGGAAACTCGTATTATCGGGTGGTTGAATCGTTTGTATCCAGAATAATTATTAAAAATAAAGCTAATTAAATTTTAAACAACGCTTGTCGTCAACGGAACTGAGTCAGCACTGTAAATCTCTCTCCTCTTTCATTGAAGTCAGCCGTGAGTTAACACCAAATAATTTGTACCGTGATATAATGTTTTGTGACCTCTTTGATGCTAATGCAAGATATAAGTTCCTTTTATGTCCTCGAGAGCTGATCTCTAAGAGAGTTTGAAAGGTCATCTCATTCACAGAGGTTCTATCGAGCGATGCCATTGGACAGTATTTAAGAAAACTGTGGAAAGGCATGTATTAACAGAGGCGGGAACACAAGAAGCAAGGCTCTGTGCTTTTCAACATTTTGAAACGCCACTGTTTGGTAACTGCAAAGAATTCAGGCGAAATCCATCCGTTGCATGGAAAAACCCCGCAGCTTTTCAGCTAAACTTATCAATGGAGCAATTGCTGGAGTTGTTGGTGTTTCTTGTACCTTCCCTTTGGACCTCGCAAAAACAAGACTTCAGGATCAGCGAAATCTTGGTCCTCGAAAGCAATACAGAAACCTAATGGACTGCTTATGGAAAGTGGCAAAAGCGGAAGGGGCACGGGGTCTTTACAAAGGCATAGGAGTAAATTTGTTGCTTATCAACCCAGAAAAAGCGATTAAACTTGCTGTTAATGACCAAGTAAGACAGATGTACGGTGGTAAAAGGCGAAGGTTGCCTTTATCAAAAGAAATGATTGCAGGCGGTGCTGCCGGCTTTTGTCAGGTAATAATTACAACACCGATGGAAATGCTGAAAATACAGCTTCAAATGGCAGGCACACAAAATTTGGCCGACTCTCCAATGACGCCCAATACAACGACGGCAGTAGCAGCCGCCAGTTCAAACGTGAGAACATTTGGCACCAAATCAGGTACTTTGCCAAAATCTGCTGCTGAAATAGCTCAAGACGTACTGAGAAGCAAGGGAGTTAAGGGCTTATATAAGGGACTTGGTGCTACATTAGCAAGGGACGTGCCTTTTTCTTGTATTTACTTTCCTCTGTTTTCCTTTTTGCGGCTTGAGTTTCAGCCTGTGGAAGGTCCCAGTCCTTCACACAGTTTGTTAGCGGGCTGCGTAGCAGGAATGATCGGAAGTCTTGCAGTGACTCCAATGGATGTAGTGAAGACGAGACTTCAGGTTCTAAGGAACGCTCAGGGCGAAGCAGCTTACAGCGGAATCGTAGATTGTGTACAAAAAACATACGCAAACGAAGGAATAATGGCATTCTACAAGGGCGCGGTACCTAGAATGATAGTCATCGCCCCATTATTTGGGATAGCGCAAATGGTGTACTTTCTCGGGGTGGCAGAATGGATGATTGGGTGGGAAGTATGACAAGATGGCGCGCAGGCGACAAACTCCTTCCCTTCACATGGCAAGGGATGGGTAGGCCAGGCCAGGGAAGAAATGGGCTGCTGCAATGAAACCAAATCAAATAAAAGCATTCAGCGATACCTTCTTTCATTGCACGAGAAAGTCAATGTCAACGGCTCAGAAATTTCCAACAAACCGTTAAATAAAAAAATTCTGGCAATTACGTCAGACCGGATTTTGTACATAATCTAACGCTTATTACAGAGACATAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DB41	Mitochondrial glutamate carrier 2 OS=Mus musculus OX=10090 GN=Slc25a18 PE=1 SV=4
Q08DK4	Mitochondrial glutamate carrier 1 OS=Bos taurus OX=9913 GN=SLC25A22 PE=2 SV=1
Q9H1K4	Mitochondrial glutamate carrier 2 OS=Homo sapiens OX=9606 GN=SLC25A18 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005570 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR002113 all species →	Family	ADP/ATP carrier protein, eukaryotic type	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR051028 all species →	Family	Mitochondrial Solute Carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45678 all species →	MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005471 all species →	Molecular Function	ATP:ADP antiporter activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0140021 all species →	Biological Process	mitochondrial ADP transmembrane transport	Interproscan
GO:1990544 all species →	Biological Process	mitochondrial ATP transmembrane transport	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005313 all species →	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0006810 all species →	Biological Process	transport	Interproscan
GO:0015183 all species →	Molecular Function	L-aspartate transmembrane transporter activity	Interproscan
GO:0015810 all species →	Biological Process	aspartate transmembrane transport	Interproscan
GO:0015813 all species →	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043490 all species →	Biological Process	malate-aspartate shuttle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15107	SLC25A18_22, GC; solute carrier family 25 (mitochondrial glutamate transporter), member 18/22	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.