Gene detail

Detailed information of anas_s0004.g5.t1 in Acropora nasuta

Genomic Location: sc0000004_pilon:183636...190294
NR annotation: XP_044173313.1, tetratricopeptide repeat protein 28-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

anas_s0004.g5.t1

TTTGCAGACGAGAGTTATGACAAGCCAGTAAACGTTACCAGAGAAGCAGGCGATCTGGCTGAAGAAGCAATGACCTATTTCAATTTTGGGTTCGCTTATGATTCCCAAGGCAATTTTGCAAAAGCTATCGAGTGTTATGAAAAGAGTATGGGGATTGCCAAGGAAGCAGGCAACCGGGCTGCAGAAGGAAAGACCTGTTTGAATCTTGGGCTCCTTTATGGCACCCAGGGCGATGTTCCAAAAGCTATCGAGTGTTTTGAAAATTGTTTAAAGATTGCCAGAGAAGAAGGCGACCGGGCTACTGAAGGAAAGGCCTACTTCAATCTTGGGCTCGTTTATCACGCCAAGAGCGATTTTCTAAAAGCTGTCGAGTGTTTCGAAAAGGGTTTAAAGATTGCCAGGGAAGAAGGCGACCGGGCTACAGAAGCAAAGGCCTATTTGAATCTTGGGCGCGTTTATTGCACCCAGAGCGATGTTCCTAAAGCTATCGAGTGTTTTGAAAATTGTTTCAAGATTGCCAGGGAAGAAGGCGACCGGGCTACAGAAGGACAGACCTATTTCAATCTTGGGATACTTTATGACTCCCAGAGCGATGTTCCAAAAGCTATCGATTGTTATGAAGAGAGTTTAAAGAGTGCCAGAGAAGCAGGCGACCGGGCTACACTAAGACAGGCCTATGTCAATGCTGGGGCCAATTATTGCTCCCAGAGCGATTTTCCAAAAGCTATCGAGTATTTGGAAAATGCTTTAAAGTTTGGCTGGGAAGCAGGCGACCGGGCTACAGAAGGAAAGGCCTATTACAATCTTGCGTACTGTTATTACTTCAAAAGCGATTTTCCAAAAGCTATCGAGCGTTACGAAAAGAGTTTAAAGAGTGCCAAGGAAGGAGGCGACCGGGATACGGAAAGAATGGCCTACTTGGGTCTTGGGCTCGTTTATTGCTCTCAGGGTGATATTCCAAAAGGTACCGAGTGTTACGAAAAGAGTTTAGACATTGCCAAGGAAGCAGGCGACCAGGCTGGAGTAACCCGTGTCAATGCATTTCTCCTGGATTCTTACTTTGCTCGTCGCAATTCTTTAAAAGATAGTAAGCCAGTCCAGACTACCAGTGGTGTTGTGGAACAGCTAGTTTCTGGCATTCAATTAGACAAGAATGGAGGGGGTGGGTCAATGTCAGAAATACCATTAAAAATTGCGTTGCAACCACAAAGCCAAACTAAAAAGGAAGGATCAAGGGTGGAACTTAGGTGTGAAGCAACAGGGAATGAATTGTCTTATAGCTGGCTACAGGACGGGCAAGAGGTGGAAGGCCAAAGAGGCTGCTGCCTGGTTTTTGAGCAAGTGAGCATGGCTGACTTTGGCTCTTATGTATGTCAAGTGAAAAAGAAAGACCAAAGGTGTTCATCAGAAGTTGCTGAGCTTGATGTCACACCTGGTGATGGAAAGAGTTACACCTTGCTAAGTGATTTGTCCCTGGATGTTGAAGAAATGGTTACAAAAGAACTGTCTTTGGAGCTTGGTGGAAAGAAAGCATGGAAGTTTTTAGCAGACCATTATAAAATGGAACGCACTAACATATATTTGCTTGAGAAGGAAAAGCTACCAGGAGTTGCCACCATTGGTCATATTAAATCAGTAGCTTCAGACTTAACTGTTTATAAATTTTGTAAGACCCTAAAGCAACCTAATATCAGGCGTCTTGACATTGTTAAAAGGCTGAAGGGTCATCTGTCCTCTTGAGTGTGACAAGTGCAGAACTGTAAGGGCACGTAATCATAGGTAGTCTTGTGAAGACTTTGTACAAGTGCTTTGGCTATTTTTTATTTGTTAATTAGAGAAGCATTCATTTTAGGTGCAGCCAACAGCATATCTTGTTTCATGTTGTTGTGCAGCAGTTGTCAGAGAGTACCAGAAAGCTCATCATAATTAATCCAAATGCATGGCCATGACGGTATATTTCTAGTGGCAGTTTTCCATGTAAATGAGGGGGTGAGTGTTAGAGCTCAAAATTTATGTCTGCCAAAATATTAAGTAAATGAAAGAAATATATATGAATATAAAGACCTTTATACCATGGCCATGGCATCCTTTGCAAAATATTCAGCGAAGGTAACAAGACACCTGCTTGTATTCTGTTGGTGCAGAGTATTATTAACTTCTTGAAGTCACACCGTAATACTCATCTGGGACAAATATACTATGACGACATTCCTATCCAGACTGAATTACACGTTCCATTTTTATTGTTTTAATAACATTCTGCTAAGTATTTCACAACAGTTCATCATATAAACGAGGGAACTAGAATCTCCAATAACTGGGAAAAGCTTCTATCACCTTGTATAATATTTAACAAATGTGCTGCGTAATGTCAACAACTTGTAATTACTGATAACATGTTAAGCAAAGAGATGTCCAACATAATTAAACCTTTTCTGTAGGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07126	K07126; uncharacterized protein	-	Function unknown	-	deepkoala