Detailed information of anas_s0006.g190.t1 in Acropora nasuta

Genomic Location: sc0000006_pilon:3155509...3180269
NR annotation: XP_015759993.1, PREDICTED: schlafen family member 5-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q68D06Schlafen family member 13 OS=Homo sapiens OX=9606 GN=SLFN13 PE=1 SV=1
Q7Z7L1Schlafen family member 11 OS=Homo sapiens OX=9606 GN=SLFN11 PE=1 SV=2
B1ARD6Schlafen family member 9 OS=Mus musculus OX=10090 GN=Slfn9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04326SLFN_AlbA_2Schlafen, AlbA_2DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF09848SLFN-g3_helicaseSchlafen group 3, DNA/RNA helicase domainDomainInterproscan
PF21026SLFN_GTPase-likeSchlafen, GTPase-like domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007421DomainSchlafen, AlbA_2 domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR038461Homologous_superfamilySchlafen, AlbA_2 domain superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR018647DomainSchlafen group 3-like, DNA/RNA helicase domainInterproscan
IPR048729DomainSchlafen, GTPase-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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TOP