Genomic Location: sc0000015_pilon:2458221...2475703
NR annotation: XP_029193083.2, LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX43 [Acropora millepora]
| CDS | ||||
| anas_s0015.g204.t2 | ||||
| Transcript |
| anas_s0015.g204.t2 |
| Protein |
| anas_s0015.g204.t2 |
| Uniprot term | Description |
|---|---|
| Q9NXZ2 | Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens OX=9606 GN=DDX43 PE=1 SV=2 |
| Q1DP69 | ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP2 PE=3 SV=2 |
| Q86TM3 | Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX=9606 GN=DDX53 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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