Detailed information of anas_s0016.g149.t1 in Acropora nasuta

Genomic Location: sc0000016_pilon:2108148...2120264
NR annotation: XP_029207438.2, SAP domain-containing ribonucleoprotein-like [Acropora millepora]
Species abbreviation ANASU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18592
all species →		Tho1_MOS11_CTho1/MOS11 C-terminal domainDomainInterproscan
PF02037
all species →		SAPSAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan
IPR003034
all species →		DomainSAP domainInterproscan
IPR040746
all species →		DomainTHO1_MOS11, C-terminal domainInterproscan
IPR052240
all species →		FamilySAP domain-containing ribonucleoproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46551
all species →		SAP DOMAIN-CONTAINING RIBONUCLEOPROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016973
all species →		Biological Processpoly(A)+ mRNA export from nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18732SARNP, CIP29, THO1; SAP domain-containing ribonucleoprotein-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP