Detailed information of anas_s0018.g101.t2 in Acropora nasuta

Genomic Location: sc0000018_pilon:1460057...1480992
NR annotation: XP_029202787.2, DNA excision repair protein ERCC-6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q03468DNA excision repair protein ERCC-6 OS=Homo sapiens OX=9606 GN=ERCC6 PE=1 SV=1
F8VPZ5DNA excision repair protein ERCC-6 OS=Mus musculus OX=10090 GN=Ercc6 PE=1 SV=1
Q9UR24DNA repair protein rhp26 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rhp26 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001951FamilyHistone H4Interproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR019809Conserved_siteHistone H4, conserved siteInterproscan
IPR050496FamilySNF2/RAD54 Helicase and DNA RepairInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45629SNF2/RAD54 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006283Biological Processtranscription-coupled nucleotide-excision repairInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10841ERCC6, CSB, RAD26; DNA excision repair protein ERCC-6-DNA repair and recombination proteinsko03400deepkoala

TOP