Detailed information of anas_s0019.g57.t1 in Acropora nasuta

Genomic Location: sc0000019_pilon:810406...835694
NR annotation: XP_029185121.2, apoptotic protease-activating factor 1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O14727Apoptotic protease-activating factor 1 OS=Homo sapiens OX=9606 GN=APAF1 PE=1 SV=2
Q9I9H8Apoptotic protease-activating factor 1 OS=Danio rerio OX=7955 GN=apaf1 PE=2 SV=1
Q9EPV5Apoptotic protease-activating factor 1 OS=Rattus norvegicus OX=10116 GN=Apaf1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan
PF21296APAF-1-like_WHDApoptotic protease-activating factor 1-like, winged-helix domainDomainInterproscan
PF00619CARDCaspase recruitment domainDomainInterproscan
PF00931NB-ARCNB-ARC domainDomainInterproscan
PF17908APAF1_CAPAF-1 helical domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR048975DomainApoptotic protease-activating factor 1, winged-helix domainInterproscan
IPR001315DomainCARD domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR002182DomainNB-ARCInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR041452DomainAPAF-1 helical domainInterproscan
IPR042197Homologous_superfamilyApoptotic protease-activating factors, helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22845APOPTOTIC PROTEASE-ACTIVATING FACTOR 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0043531Molecular FunctionADP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02084APAF1; apoptotic protease-activating factor-Platinum drug resistanceko01524deepkoala

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