Detailed information of anas_s0027.g99.t1 in Acropora nasuta

Genomic Location: sc0000027_pilon:1734088...1765404
NR annotation: XP_029194771.2, ATP-dependent RNA helicase DDX54-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K4L0ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1
Q8TDD1ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2
A3BT52DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0416100 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08147DBP10CTDBP10CT (NUC160) domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR012541DomainDBP10, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14808DDX54, DBP10; ATP-dependent RNA helicase DDX54/DBP10EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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