Detailed information of anas_s0038.g65.t1 in Acropora nasuta

Genomic Location: sc0000038_pilon:917138...955397
NR annotation: XP_029190640.2, inositol 1,4,5-triphosphate receptor associated 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZUG0Small nuclear ribonucleoprotein E OS=Danio rerio OX=7955 GN=snrpe PE=3 SV=1
A4FUI2Small nuclear ribonucleoprotein E OS=Bos taurus OX=9913 GN=SNRPE PE=3 SV=1
P62303Small nuclear ribonucleoprotein E OS=Gallus gallus OX=9031 GN=SNRPE PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423LSMLSM domain DomainInterproscan
PF14658EF-hand_9EF-hand domainDomainInterproscan
PF05781MRVI1MRVI1 proteinFamilyInterproscan
PF14662KASH_CCDCoiled-coil region of CCDC155 or KASHCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047575DomainSm domainInterproscan
IPR008677FamilyMRVI1Interproscan
IPR027078FamilySmall nuclear ribonucleoprotein EInterproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR039508DomainProtein KASH5, EF-hand-like domainInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR028168DomainKASH5-like coiled-coil domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15352LYMPHOID-RESTRICTED MEMBRANE PROTEIN, JAW1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

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