Detailed information of anas_s0039.g39.t2 in Acropora nasuta

Genomic Location: sc0000039_pilon:1003885...1036861
NR annotation: XP_015766188.1, PREDICTED: nuclear RNA export factor 1-like isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UBU9Nuclear RNA export factor 1 OS=Homo sapiens OX=9606 GN=NXF1 PE=1 SV=1
P58797Nuclear RNA export factor 1 OS=Coturnix japonica OX=93934 GN=NXF1 PE=1 SV=1
Q5R752Nuclear RNA export factor 1 OS=Pongo abelii OX=9601 GN=NXF1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09162Tap-RNA_bindTap, RNA-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015245DomainNuclear RNA export factor Tap, RNA-binding domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR018222DomainNuclear transport factor 2, eukaryoteInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR030217FamilyNuclear RNA export factorInterproscan
IPR032710Homologous_superfamilyNTF2-like domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10662NUCLEAR RNA EXPORT FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan

TOP