Detailed information of anas_s0044.g72.t1 in Acropora nasuta

Genomic Location: sc0000044_pilon:1155773...1222132
NR annotation: XP_029213827.2, uncharacterized protein LOC114977326 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P35444Cartilage oligomeric matrix protein OS=Rattus norvegicus OX=10116 GN=Comp PE=1 SV=1
P49747Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF13306LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF12947EGF_3EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR026906RepeatBspA-type LRR regionInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR024731DomainEGF domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

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