Gene detail

Detailed information of anas_s0056.g8.t1 in Acropora nasuta

Genomic Location: sc0000056_pilon:110637...126465
NR annotation: XP_044163458.1, LOW QUALITY PROTEIN: ATP-dependent RNA helicase TDRD9-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

anas_s0056.g8.t1

TGGCCATGTGGAAGAGAAGTGGTAAAAGAAGAACAACATTGCATATGGCGGAAAGTGTGAGAAACTTGTAGGAACAGTCATCCGTTGTTGAGCGAGACAGTAGGCCATTTTAAAGATGGGAGATATAAGCCTTGACATGATAAAAGACTTTTACAGCCTGAAGCCGCTTTCTAAGGCCAATAACATGACAGACGCGAAAATAACAGGAAGATTGTTGCAGCATGAACCTCAGGATTTTCGCGGAGAACTCAAGTTGCCTAAGAAGAACGTGCAAAGCCCACCAACGTCTCCTTCATTTATTGGTGGATACTGTTCGACTGGGCCAAAACTGGAGGATCTTTATGACGAGATGGACCAGCTAGAAAGCAATCCCCCCCTTGTGGTGTCAGATAAAGAACCAGCTGCTTTGAGAGAGAAAGAGGCCTCACACATTTTTGACAACTACTCGTTTGATCACACATATTCTTCAGACCTTCCTATAACTTCTTACCGTCAGCAAATTGTAGATACCATTGAGAGCAATTCGGTGACCGTCATACAAGGAGCTACTGGTAGTGGGAAGACCACCCAGGTTCCCCAGTATATTCTAGATGAGTATGCCAAGGACCAACGGTATTGTAACATCATCGTTACACAGCCAAGGCGAATTGCAGCTGTCAGTATTTCCAAGCGAGTGTGTCAGGAGAGGGGCTGGACACAGGGTAGCTTAGTTGGATATCAAATCGGAAGAGACAAGTGCATCAGTGAGGACACACGCCTGTCTTACGTCACAACCGATGTGTTGCTGAATAAGCTTATTCAAGAAAAGAATATGAACCAGTTCACCCACGTTATTCTGGATGAGGTACATGAACGTGACCAGAGCACAGATTTCTGTTTATTGGTGGTGAAGAAATTACTACGAACTAATTCCAGACTTGTGAAGGTTGTGCTAATGTCAGCCACCATTCAAAGTGATCTGTTCTCCATGTATTTTGCTGTTCCTGTACGGGGTAAAGTCGAGGGTGCTCCAGTGGTGACAGTAGAAGGAAAATCCTTTAATGTGGTAGAGTGCTACCTGGAGGATCTTAAAGACATTGCTATGCTTCCTGATATCATTGCTGAAGAACCAGGTATTGACAGAACTGGATATGAACTTGTTGTGGATCCTTCCTTTACATTCCAAAATCACCTCTCTTGAACAAGGAGATGTTTTCAAGAAGCCCCAGGAAGGATTTAGAAAGGTCATCTTGTCAACAAACATTGCAGAAAGTTCCATCACAGTTCCAGACATCAAATATGTTATTGATTTTTGCTTGGTCAAGTGCCTGGTCTGTGATGCAGAGACAAATTACCAAAGTTTAAGAATGCAGTGGTCCTCGAAGGCAAGCTGCATACAGCGCAAAGGTCGTGCTGGTCGTGTATCTACTGGATACTGCTTTAGAATGGTCACACGGCAGTTTTATGAATCATTCATTCCAGAGTTTGGCATCCCTGAAATGAAGCGCTGTCCCCTTTCACAATTAATTTTGAGAGTGAAACTGTTTGACATTGGTCCACCAAAGGCCATACTAAATCTGGCATTGCAGCCTCCTGACACAGATGATATTGAACGAACAATTCTCCTGTTGAAACAGGTTGGTGCCCTTACTGTACGTATGAGAAATGGCACAATAAATCCCTGGGATGGTGAGCTGACTTTTATTGGCAAAGTAATAGGACAGTTGCCCATTGATGTCCATCTTGGAAAGCTCTTGGTGCTGAGTTATGTGTTTGGCTGTCTTGAGGAATGTCTTGTGATTAGTGCTGCTCTATCTCTGCGGTCTTTTTTTGCCAATCCCTACAAAAGAGAATTTGAAGCCTACAGTAAGAAGATGTCCTGGAGTGAATTTTCCTACAGTGATTGCATCACAGTTCTCAATGCTTACAAGGAGTGGAGTATGTTGAAAAGGAGGAAAGGATTCCCAAGGGGAGAACATAACTGGTGTTCAGAAAACTTTATTCAAGCAGGACGCATCAGAGAGGTTGAAGAAGTCATTAAAGAGTTGGCCAGCAGATTGAAGGAATTTAATATCATTTCAATCAAACCACTTCATCATAAAAATAGCGGTTCAGCAGAGTCTATGCGCATTTTAAAGATTGTGATCTGCGGTGCATTTTATCCCAATTACTTTTCTTCGAGTGATTTGGATGAAGCTGAAGTCATGAAGATCATGTCTGGGCACGACCCCTGTACTACTGTCATTGTAAGGAATATGCCTCCTCATGGT

Protein

Uniprot

Uniprot term	Description
Q8NDG6	ATP-dependent RNA helicase TDRD9 OS=Homo sapiens OX=9606 GN=TDRD9 PE=1 SV=3
Q3MHU3	ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus OX=10116 GN=Tdrd9 PE=2 SV=3
Q14BI7	ATP-dependent RNA helicase TDRD9 OS=Mus musculus OX=10090 GN=Tdrd9 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18934	ATP-DEPENDENT RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0010529	Biological Process	obsolete negative regulation of transposition	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan