Genomic Location: sc0000066_pilon:207726...226094
NR annotation: CAB4038090.1, Retrovirus-related Pol poly from transposon TNT 1-94, partial [Paramuricea clavata]
| CDS | ||||
| anas_s0066.g7.t1 | ||||
| Transcript |
| anas_s0066.g7.t1 |
| Protein |
| anas_s0066.g7.t1 |
| Uniprot term | Description |
|---|---|
| P10978 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 |
| P04146 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF00858 | ASC | Amiloride-sensitive sodium channel | Family | Interproscan |
| PF00001 | 7tm_1 | 7 transmembrane receptor (rhodopsin family) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR000276 | Family | G protein-coupled receptor, rhodopsin-like | Interproscan |
| IPR025724 | Domain | GAG-pre-integrase domain | Interproscan |
| IPR017452 | Domain | GPCR, rhodopsin-like, 7TM | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR001873 | Family | Epithelial sodium channel | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42648 | TRANSPOSASE, PUTATIVE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0004930 | Molecular Function | G protein-coupled receptor activity | Interproscan |
| GO:0007186 | Biological Process | G protein-coupled receptor signaling pathway | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0005272 | Molecular Function | sodium channel activity | Interproscan |
| GO:0006814 | Biological Process | sodium ion transport | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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