Gene detail

Detailed information of anas_s0081.g12.t1 in Acropora nasuta

Genomic Location: sc0000081_pilon:280517...283975
NR annotation: PFX12880.1, Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P04146	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q94HW2	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13976	gag_pre-integrs	GAG-pre-integrase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR025724	Domain	GAG-pre-integrase domain	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan