Genomic Location: sc0000083_pilon:817732...887970
NR annotation: KAJ8029071.1, hypothetical protein HOLleu_28379 [Holothuria leucospilota]
| CDS | ||||
| anas_s0083.g60.t1 | ||||
| Transcript |
| anas_s0083.g60.t1 |
| Protein |
| anas_s0083.g60.t1 |
| Uniprot term | Description |
|---|---|
| Q5ZIH9 | Coiled-coil domain-containing protein 174 OS=Gallus gallus OX=9031 GN=CCDC174 PE=2 SV=1 |
| Q9UR07 | Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 |
| P0CT42 | Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-7 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13300 | DUF4078 | Domain of unknown function (DUF4078) | Family | Interproscan |
| PF05729 | NACHT | NACHT domain | Domain | Interproscan |
| PF13516 | LRR_6 | Leucine Rich repeat | Repeat | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF17919 | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR025066 | Family | Coiled-coil domain-containing protein 174-like | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR007111 | Domain | NACHT nucleoside triphosphatase | Interproscan |
| IPR050951 | Family | Retrovirus-related Pol polyprotein | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR041577 | Domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Interproscan |
| IPR041588 | Domain | Integrase zinc-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37984 | PROTEIN CBG26694 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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