Detailed information of anas_s0104.g42.t1 in Acropora nasuta

Genomic Location: sc0000104_pilon:954361...970658
NR annotation: XP_044182749.1, uncharacterized protein LOC114952001 [Acropora millepora]
Species abbreviation ANASU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UR07Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000000 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098
all species →
zf-CCHCZinc knuckleDomainInterproscan
PF00665
all species →
rveIntegrase core domainDomainInterproscan
PF17919
all species →
RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921
all species →
Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF05380
all species →
Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128
all species →
Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036397
all species →
Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001878
all species →
DomainZinc finger, CCHC-typeInterproscan
IPR012337
all species →
Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584
all species →
DomainIntegrase, catalytic coreInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041577
all species →
DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588
all species →
DomainIntegrase zinc-binding domainInterproscan
IPR008042
all species →
FamilyRetrotransposon, PaoInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955
all species →
RETROTRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0015074
all species →
Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for anas_s0104.g42.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP