Detailed information of anas_s0110.g6.t1 in Acropora nasuta

Genomic Location: sc0000110_pilon:256016...263205
NR annotation: PFX13527.1, Pogo transposable element with KRAB domain [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9FT74ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1
Q9VGI8RecQ-like DNA helicase Blm OS=Drosophila melanogaster OX=7227 GN=Blm PE=1 SV=1
Q8L840ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006268Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan

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