Gene detail

Detailed information of anas_s0175.g8.t1 in Acropora nasuta

Genomic Location: sc0000175_pilon:196996...209718
NR annotation: XP_015757696.1, PREDICTED: WD repeat-containing protein 41-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

anas_s0175.g8.t1

CCTCATTTTAACTATTTCCCATGTCTTCTCGGTCCTGAGAAACATGGCGGAGATAGATTTGTTTAAGCAGCTCGTCCCACTCTTGCCAGACGAGCCTCTGTAAGAGTTATGTTCCGCAGACGATCAACAGACAACAGAGGCAGGCAACAGattgattgtttACCTGAGATTGAAGATGATCAGCCCAGAAACCCATTCACAGAGCTGAGGCTTCTTTCATTTCATACAGATATTGTTCATCTCTTGACTATCATTGATGAAAGAAGGTTTGCATCTGCATCTGATGATAATCTTGCAGTCATTTGGGATGCTAAGACTGGCAGACGTCTTAATGTTCTCAGAGGTCACACTCGCCCAATTAAATGTATGCTTCTGCTACGCCAGAGGCAGCAGTATCAAAATGAAGAGGAAGCAGCAAGTTTGCTTTTGACCGGTTCATCAGACAGAACCATTTTAGTTTGGGATGTGAATGATGGACAATGTTTGCATTCTATCTCAGACCACTGTGGTACTGTGAAGTGCTTAGTCAGCATTAAAGGTGAAAACATTTTTTTTTCTGGGGGTCAAGACCTGTGCCTGTGGAACGAGAAAGGAGAATTGCTGGATAAAGTTAGCCGGAGCACTGAGCACTCTGACATCCATTCATTGCTACCAGTAAAAAACAAAAGATTAGTGGCAGCATCCAATAGGTCATCTCTCGttgtgtattCCATAGAAAGTCAAAGAACTGCACATGACCAGGAAAAGCTAAAAATTTCAGAAATTAAGAAACTTTCTCCTCACAGGGAGGCTATTAGATGCCTCGTCAACGTGGCAGATGGTATGTTTGCGTCGGCATCACTTGACGGAGCAATTGTCCTTTGGAGTTCACTTACCTTCTCTTATACAAGACAGTTCAATTATGTTAAAAATTATGAAGGGCCTTGCCATACTTACCCTTCCAGTGCCCAACATCTGTTTATTGTTGATCAGAGATACATCTTTGCTTCGATTGGCCTTGGTTTCTACCTATATGATGCAATTTCAGAGAAATGCCTCGCTAGAGTTCCTAATGCTCACCATGGAAAGATAATCAATTCTCTGTTGCTGTGTGAGGGCTATATAATGGCCACTTGTTCGGAGGATGGCTCGGTTAGACTTTGGGGATCCCCTAATCCTCGTCTAGTCTGCGATGGCTCTCAGGTGAAACAATTCACTTTACAAATTGAACGATTTCTTGGTTTAAGTTCTTCAGAGATCCATAGTTTGAGCACTCCATTGATTCCAGCTCTAATTGGGGAATGCGTTGCTCACTCAGGTGCTATCAATATGGCTGTGAACTTGGGTGGAGAAGGTTTCGCTTCGTGCGCAAGTGATGGCCTTGTTGTTCTATGGAAGGATGGTGTTTTGGAAAAAGAGAGACGAAACGAAATGGTGCGTAATATATTGCTTTCAATGGATACCAAATCGACATAAAGCAATCCCTCAAGGTCAAGAATAAGATTTACTTCATCACCGACGTTAGTGGACCTACTTAAAATTTATTTCCCATTAGCTGAATTATTTCTCTTCTTATCTTACTGGCTAAATTTATTTTGGAAGTAATATGTAATATGGAGCGTAAGCGCGTACCATTTGAGTGGAATTTTTCATTTGAGTGAGAATTTCTCGACGAAAGGTAATGAGCTCCATCTTTTGGAACCTTTTATTTTTAATAATGTGAATGATGGTACGCCTTGGAAGGTCGCACCATTAGGTTTCTCATTGAAGAGACCCGTTTTTCTGACAAATGCCCCGGAACGCGCCTCAAGAGATAGGGATGTAAATTCAACTCTTGATGGCAAATAGCCACGTTTCACAATGAAACTATAATGGGCAGGGTATCTTTTTTCTGTTTAGTATCAATCGATCGGTTCGCTCAACGTTCATATTTTCAAAAAAGCATGATCTCCTTCAGAAGTGAGTCATTCCTTAAAATGGAGAGATGCGAGGAACCAAatagaccgtattcattaagtggcagccactaaattattcttttacccttatgctaacctgccCTAGTGGCCTCAACAAATTTTGTCCATAAAAGTGAGGCTATAGAATAATCTGTTGGCCGCCGTCACTGGTGTGCGTGCTCTTTGGAAACTAGATGGTTTTATTTCAGTGCAAAAATAAGGGGAATCTTTCTAAGTAGATGACCCAAAATATATTGAGTACTTTTCTTTACTATAACAGAAAAGATAAGACTTATTTTTTCATCTGAAATGCAACTTAACAATTATGTTTGTGATAGTTTACAATTTTCAAATAGTACATACCCTAGTAGACGCGAGAGATGCGTAAAATCGCTTAAAAGGAGTCAAGATTTTGATAAAAATGTCCTGGTTTTAAGGCCCATTTACACGACAGAAACATTGAATACAGATCTGTTTTTTAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR040102	Family	WD repeat-containing protein 41	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22805	WDR41-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0010506	Biological Process	regulation of autophagy	Interproscan