Gene detail

Detailed information of anas_s0436.g3.t1 in Acropora nasuta

Genomic Location: sc0000436_pilon:34426...42025
NR annotation: XP_015774775.1, PREDICTED: nucleotide-binding oligomerization domain-containing protein 2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

anas_s0436.g3.t1

CACCGCTGCCTTTGCGTCTGGACGGCTTCTCTCACTGCCATTTGCAAGATGTTATTTTGAACGTCTCAATATAAGGAAGTAAAGTGATAAAAAACACCACTTTTTCTCTTCTTTCAGCTGAGTTGCCACGCATCCATTCAACCATGCCTTTTCTGTATGAGAACGTAGGTGGTGAAGGTGTTCACACTCCCCCGTTTGAATTATTGACGGTGCTCCGATTTTGGCATtagagagattaagcatgacgtttacggcaaacggcaagatgaaattttgtttttgctgaaacacggagaaacttgatttatttaagctcctttcttgtctgttaattagatatatcaagtaactcctcaaaagagtgaaacaagttgaaaaacctaaattttcatgcttttgtgacacgtagctgcctgctgtttgcagtttgccgtaaacgtcgtgctaaacctctctattCAAAATTTTGAACTGCTAGTAAGAGTGTAAGAAATGTAAGCTGTAACAATTTGCGTATGGTTAGTGGGGCCCCACGTGAACAGAACACTTAACTGTACAAATTTTGGAGCAATGGAAACTGATTCTTTGGGTACCGTGTCAACGCTGCCCGAGACTGCATTCTTTTCGTAATTATTTCACTCCACGTGTTTTTATGTAAAGGAAACTAAAAATTAGAAGGGAAACAGAGTTAATACCAGTTCACAGACTCACACATATACAGATCATAGATATAAATAGAATAAATAGAACTACAACCTAAGTATACTTTACCGATTTTTGACTCGCTAACGCAACAGATAACGCATGATATAACTTACTTGAAAGATTGCTGTAAAGGAGGTTTAGggtttatcccatagaaaagaaaccccttttctttgaaagctttcttagcattgttctagcaggccggttggctaaagttctttacttgcattttggattttggtttcagatctttttgacctcgtgaaatacataatcattattcgccagctttacaaagaccgtgaaggatggctggcgcctttcccgtggtgtgaagagtttcgattcaatctcgataccatttttaccagactcaaatttgtcagcagaagaaaagaacgaggagtaaaaactgatgacagtgttgacatgtttcaaatatttcaaccgcatcaagaatgttcacagccgaggagggttttgattgaagggcagccaggcatgggaaagacaacgtattgtcacaagattgcttttgactgggcaaagaaaagaaaaggtggagagtcatttcctgatgttatacttgttctactattaaaatgccgagacatcaacggtggcctatgggaagctattgatgaccaactcttaccgagagaagtgaacgaagaagagaaagagagatttttcacgttcattcggcaccaccagtcaaaagttttagtggtacttgacggattagatgaattacccaggagccaattgtcgatctatacagacatcattcaaggaagagttcttccagagtcttacatagtggttactgcacgacatgaagttggagtgaaggtacgagaatgctgccacaccctgttagaggttgaaggatttactgagactgatgccagagagttcattcagaggtatttcaaagaagagcatttggcaaaaaagttgtcggacaaactggactctgacataacacttGaagaccttgcaagaaatccgttaaacacggctcttctatgcctcctctgcgaagactttggaggaaaatttcccgcaagcagaagtctgctttactttgaaatagtcgagtgcgtgctgagaaggtataggcgaaagatgaaattaccagaaacagaccaagacctcgtacctttataccgagttgaactgaagcaacttggccgtatcgccagtgagggtttgcggaacgacagtatgttttttgaccagagtgcatttcagggtctctcaagcgatgtaaaatctggcctcggatttttgtcagtggaagctggacgaagcaaacgaagaccaagtcgaagctatggcttcctgcacaaaagctttcaagaattcttcgcagcactttttcactgttgtcaggttcttgataaggaaatctctgttggtagcttaattgctgactgcagatattttcaagagttcaagcaggtgctgatgttcacgagtgaattgaaagaaaattcaacgctgacatcgctggacttgtgtgctaataatattggcaaagttggcgctgatgcactggctaaaggattgaaagaaaattcaacgctgacatcgctggacttgtgtgctaataatattggcaaagttggcgctgatgcactggctaaaggattgaaagaaaattcaacgctgacatttctgagcttgcatcgtaatgcaatcgggaatgacggtgctgttgcactggctaaaggattgaaagaaaattcaacgctgacatcgctggtcctgtctgccaataatattggcgacgttggggctgatgcactggctaaaggactgaaagaaaattcaacgctgagatcgctctacttgtcttctaattatattggcgacgttggggctgatgcactggctaaagaattgaaagaaaattcaacgctcacatcgctggacgtgtctgataataattttggtgacgttggcgctgattcactggctcaaggattgaaagaaaattcaacgctgacatcactggaattgcataataatgcaatcggcaatgacggtgctgttgcactggctaaaggattgaaagaaaattcaacgttgacttggctgagcttgtctggtaataatattggcaaagttggcgctgatgcactgactaaaggattgaaagaaaattcaacgctgacagtagctggtttataagctaatttcattgacgaggatgttgcagctgcaAGAGAATCAAGGGCTAAAAGTCAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46312	NACHT DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan