Detailed information of anas_s0486.g2.t2 in Acropora nasuta

Genomic Location: sc0000486_pilon:27046...52486
NR annotation: XP_044174696.1, N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1-like [Acropora millepora]
Species Acropora nasuta · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q766D5N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Mus musculus OX=10090 GN=B4galnt4 PE=2 SV=1
Q76KP1N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Homo sapiens OX=9606 GN=B4GALNT4 PE=1 SV=1
Q6L8S8Beta-1,4-N-acetylgalactosaminyltransferase 3 OS=Mus musculus OX=10090 GN=B4galnt3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000125 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07691
all species →		PA14PA14 domainDomainInterproscan
PF02709
all species →		Glyco_transf_7CN-terminal domain of galactosyltransferaseFamilyInterproscan
PF05679
all species →		CHGNChondroitin N-acetylgalactosaminyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011658
all species →		DomainPA14 domainInterproscan
IPR037524
all species →		DomainPA14/GLEYA domainInterproscan
IPR029044
all species →		Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR027791
all species →		DomainGalactosyltransferase, C-terminalInterproscan
IPR008428
all species →		FamilyChondroitin N-acetylgalactosaminyltransferaseInterproscan
IPR051227
all species →		FamilyChondroitin sulfate glycosyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12369
all species →		CHONDROITIN SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008376
all species →		Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0032580
all species →		Cellular ComponentGolgi cisterna membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for anas_s0486.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP