Gene detail

Detailed information of anas_s0776.g5.t1 in Acropora nasuta

Genomic Location: sc0000776_pilon:57320...68935
NR annotation: CAH3027811.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

anas_s0776.g5.t1

cggaagtgaaaagctggtgctttagtaatctTTTCTGttatcattattattattattattattattattatcattattattattactattattattattattattatatattTTACTGTTAATTATTTGCTTAATCTAGATTCCAGTCCCCTCATCCGCTTTGTTATATATAAATAGCTGTTTTAAATGTCAACAGGGGCGGATCCAGGATATTGAGAAAGAGGGGGCCTGTCACTGAAATTGCATTTTTGAATCTACATCATTTTTTAAAAATTAAAAAAATATATTTATTCAACAAAAGGGGGGTCAACGCCCCTGGTCAACGgttacttttgaaaatgtatgtagagcacatacgaaacgtcaagtcataatcaaaatgaacaagttcaatatgtttatcactgctgtttgtgtcttattttcgatcaaactacgatggcccaagaacaaaaAATCGGCGACAATAATTTCACCGCCTCCGACCCCAGCGCGTGTTTTGGAAGGACAACCTTTGAAACTAGAGTGGACGTTCACTGTTCAAGGAACATTTCGTCGAGTGCAGATAGCATTTTCAGGAGCTCCCTCAGCCTTTTTGGAGACGCGCCTTACAGGATCATTTATAGAACCAGCATTCGAAGGTCGTCTTACAGCGAGCACTACAGAAAGAAATGCAACGATAACATTTTTGTCCGTGAACAGAACAGACAGCGCTGATTATGTTTTCGCAGTCTTGGATTCTTCTGGTGTCACTGCAGAACCATTGAAAGTTATAGTTGAGTACCCACCCTCAGTGATAAAAGGAGCTCCGGAACCAGTTGTGCTGAAAGGTGGCTCAGCAATCAGTTTAACCTGTACTGCAGATGGGGAACCAGCGCCAAAAATCACTTGGACAAAAGTGTTTGCTAATGGAAGTGATAGTCACGTGCTTTCTACCGGTGCACAGTTTATACTACCCAACAACAGAACCAATGATGAAACATATCGTTGTAAGGCAAGCAATGGCAAAGGAAGTTCTGTGAACAACACAGTAAAGGTGGTGGTTAATTATGGCCTGGTCGATGATGACACGGTTGTAGAGATAAAGGCCTTAAAGCTCCTGAAAGAGTACAGTGTTGAACAAATCACATCTGCAACATCTGTGGTACCCAAGCATGTGCTCAAGAGACAGTGCTTTGTTGTGAAAGATGGGAAGTGTGTTTTGCAACGGTCGCACAGTTACTACTATCAGTGCCAACACATTCTTCTAGTTACAGAAAGAAAGAGCTGTGTTTTCATTTTGTATGCTGAAAGTGGTCCCGATTCCGTTGAGAAAATCACAAGAGATGAAGCCCTCATCACAAAGATCCTGGAGTACATCCAAGCACTGTGGATGCGTGTGATTGCCCCCGAGATCTTCGAAATGCGCGCACCTCGAGATCTTCTCCCCTTCATCATACCAGAATCTCCATCAAGTGAACCTGCCACCCACTGTGACACAGGGACACCCGCCTCACTGCCAGCTTCAGCCTCATTTGAAGATCCGTGTGAACCTGTCACCAACTGTGACACAGGGACACCCGCCTCATCGCCAGCTTCAGCTTCATTTGACGACCCGAGTGAACCTGCCACCCACTGTGACACAGGGACACCCGCCTCACTGCCAGCTTCAGCCTCATTTGAAGATCCGTGTGAACCTGTCACCAACTGTGACACAGGGACACCCACATCAGTGCTTTATACTTCTTACAGTCAAGATGAGATCCAGGCTGCAGAGGCTCTTCTTTGTTCATGTACTACACATGAGAGACCTTTAGCTAGTCCAGCACAGGAACTAACAGTTTTCCCTTGGGGTGGAATGACAAGCAATGGGGTTCTACTAAGCAATACCTGCCCTTTGGACAACTGGCTTATGATCTTTCAAGCTCTTGTAAAATCAGGCATGGTGAATCTGGCAGACCTTCACGAATCTGGTCAAATAATAGCAACTGCTTTGAGGCTTATTGAATGTGGTCAGTATGCAGATGCCAAGCTTCTGATAATACAGTCCCTGCAGCATCCACACCAAGGTATATCTCGACATTTTTTCTCAAATTCACACTATTCACCTTTTTTTAAACTATGAATTGCCAAGTTACAGTAACATTACCTTGACAGTTTTGCATGTACTTGTACATGGATGTTTATGAACAAAATAAGAAAAAAAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR051275	Family	Cellular adhesion and signaling domain-containing protein	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11640	NEPHRIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0005911	Cellular Component	cell-cell junction	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan