Gene detail

Detailed information of anas_s1925.g1.t1 in Acropora nasuta

Genomic Location: sc0001925_pilon:1...17890
NR annotation: XP_029187764.2, LOW QUALITY PROTEIN: collagen alpha-2(I) chain-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P20702	Integrin alpha-X OS=Homo sapiens OX=9606 GN=ITGAX PE=1 SV=3
Q2UY09	Collagen alpha-1(XXVIII) chain OS=Homo sapiens OX=9606 GN=COL28A1 PE=1 SV=2
P32018	Collagen alpha-1(XIV) chain OS=Gallus gallus OX=9031 GN=COL14A1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00095	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR050525	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR008197	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0030414	Molecular Function	peptidase inhibitor activity	Interproscan