Detailed information of asel_s0001.g104.t1 in Acropora selago

Genomic Location: sc0000001_pilon:1289294...1300070
NR annotation: XP_029186778.2, autophagy-related protein 16-1-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q676U5Autophagy-related protein 16-1 OS=Homo sapiens OX=9606 GN=ATG16L1 PE=1 SV=2
Q5RAC9Autophagy-related protein 16-1 OS=Pongo abelii OX=9601 GN=ATG16L1 PE=2 SV=1
Q8C0J2Autophagy-related protein 16-1 OS=Mus musculus OX=10090 GN=Atg16l1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08614ATG16Autophagy protein 16 (ATG16)Coiled-coilInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045160FamilyAutophagy-related protein 16Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR013923DomainAutophagy-related protein 16 domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19878AUTOPHAGY PROTEIN 16-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000421Cellular Componentautophagosome membraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17890ATG16L1; autophagy-related protein 16-1-Mitochondrial biogenesisko03029deepkoala

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