Genomic Location: sc0000001_pilon:1683143...1754922
NR annotation: XP_029185516.2, protein FORGETTER 1-like isoform X1 [Acropora millepora]
| CDS | ||||
| asel_s0001.g145.t1 | ||||
| Transcript |
| asel_s0001.g145.t1 |
| Protein |
| asel_s0001.g145.t1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| F4IF36 | Protein FORGETTER 1 OS=Arabidopsis thaliana OX=3702 GN=FGT1 PE=1 SV=1 | |||
| Q5BJL5 | Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2 | |||
| A3KN83 | Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 GN=SBNO1 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF13871 | Helicase_C_4 | C-terminal domain on Strawberry notch homologue | Domain | Interproscan |
| PF13872 | AAA_34 | P-loop containing NTP hydrolase pore-1 | Domain | Interproscan |
| PF09588 | YqaJ | YqaJ-like viral recombinase domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR011604 | Homologous_superfamily | PD-(D/E)XK endonuclease-like domain superfamily | Interproscan |
| IPR026741 | Family | Protein strawberry notch | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR026937 | Domain | Strawberry notch, helicase C domain | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR011335 | Homologous_superfamily | Restriction endonuclease type II-like | Interproscan |
| IPR039187 | Domain | Strawberry notch, AAA domain | Interproscan |
| IPR019080 | Domain | YqaJ viral recombinase | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12706 | STRAWBERRY NOTCH-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0031490 | Molecular Function | chromatin DNA binding | Interproscan |
| GO:0042393 | Molecular Function | histone binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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