Detailed information of asel_s0001.g46.t1 in Acropora selago

Genomic Location: sc0000001_pilon:468430...476486
NR annotation: XP_029188652.1, LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase ddx6 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q54E49Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium discoideum OX=44689 GN=ddx6 PE=3 SV=1
P54823Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1
P23128ATP-dependent RNA helicase me31b OS=Drosophila melanogaster OX=7227 GN=me31B PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47960DEAD-BOX ATP-DEPENDENT RNA HELICASE 50Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0033962Biological ProcessP-body assemblyInterproscan
GO:0034063Biological Processstress granule assemblyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12614DDX6, RCK, DHH1; ATP-dependent RNA helicase DDX6/DHH1EC:5.6.2.7
Chromosome and associated proteinsko03036deepkoala

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