Detailed information of asel_s0010.g14.t1 in Acropora selago

Genomic Location: sc0000010_pilon:369376...373645
NR annotation: XP_044177341.1, uncharacterized protein K02A2.6-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000003 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665
all species →		rveIntegrase core domainDomainInterproscan
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921
all species →		Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17919
all species →		RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF14893
all species →		PNMAPNMAFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584
all species →		DomainIntegrase, catalytic coreInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041588
all species →		DomainIntegrase zinc-binding domainInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041577
all species →		DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR048270
all species →		DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR050951
all species →		FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984
all species →		PROTEIN CBG26694Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0010.g14.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP