Detailed information of asel_s0011.g3.t1 in Acropora selago

Genomic Location: sc0000011_pilon:49096...85785
NR annotation: XP_044179715.1, integrin alpha-8-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q13797Integrin alpha-9 OS=Homo sapiens OX=9606 GN=ITGA9 PE=1 SV=2
B8JK39Integrin alpha-9 OS=Mus musculus OX=10090 GN=Itga9 PE=1 SV=1
P13612Integrin alpha-4 OS=Homo sapiens OX=9606 GN=ITGA4 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000604 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08441
all species →		Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan
PF20805
all species →		Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF01839
all species →		FG-GAPFG-GAP repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013519
all species →		RepeatIntegrin alpha beta-propellorInterproscan
IPR013649
all species →		DomainIntegrin alpha, first immunoglubulin-like domainInterproscan
IPR028994
all species →		Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR018184
all species →		Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR032695
all species →		Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR000413
all species →		FamilyIntegrin alpha chainInterproscan
IPR048285
all species →		DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR013517
all species →		RepeatFG-GAP repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220
all species →		INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005178
all species →		Molecular Functionintegrin bindingInterproscan
GO:0007160
all species →		Biological Processcell-matrix adhesionInterproscan
GO:0007229
all species →		Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305
all species →		Cellular Componentintegrin complexInterproscan
GO:0009897
all species →		Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627
all species →		Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0011.g3.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP