Detailed information of asel_s0018.g91.t1 in Acropora selago

Genomic Location: sc0000018_pilon:1496274...1526928
NR annotation: XP_015757956.1, PREDICTED: uncharacterized protein LOC107337339 isoform X2 [Acropora digitifera]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61824Disintegrin and metalloproteinase domain-containing protein 12 OS=Mus musculus OX=10090 GN=Adam12 PE=1 SV=2
P70505Disintegrin and metalloproteinase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Adam1 PE=2 SV=1
O43184Disintegrin and metalloproteinase domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ADAM12 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000540 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01421
all species →		ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF08516
all species →		ADAM_CRADAM cysteine-richFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR002181
all species →		DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR014716
all species →		Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR006586
all species →		DomainADAM, cysteine-rich domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR001762
all species →		DomainDisintegrin domainInterproscan
IPR035992
all species →		Homologous_superfamilyRicin B-like lectinsInterproscan
IPR001590
all species →		DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR036056
all species →		Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036436
all species →		Homologous_superfamilyDisintegrin domain superfamilyInterproscan
IPR000772
all species →		DomainRicin B, lectin domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR024079
all species →		Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11905
all species →		ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0018.g91.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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