Detailed information of asel_s0019.g11.t1 in Acropora selago

Genomic Location: sc0000019_pilon:246409...318625
NR annotation: XP_029193745.2, semaphorin-5A-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P35033Trypsin-3 (Fragment) OS=Salmo salar OX=8030 PE=1 SV=1
P07146Anionic trypsin-2 OS=Mus musculus OX=10090 GN=Prss2 PE=1 SV=1
P00762Serine protease 1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001596 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07727
all species →
RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF01437
all species →
PSIPlexin repeatFamilyInterproscan
PF01403
all species →
SemaSema domainRepeatInterproscan
PF13976
all species →
gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00089
all species →
TrypsinTrypsinDomainInterproscan
PF17919
all species →
RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036352
all species →
Homologous_superfamilySema domain superfamilyInterproscan
IPR027231
all species →
FamilySemaphorinInterproscan
IPR013103
all species →
DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR001254
all species →
DomainSerine proteases, trypsin domainInterproscan
IPR036397
all species →
Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043504
all species →
Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR009003
all species →
Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR033116
all species →
Active_siteSerine proteases, trypsin family, serine active siteInterproscan
IPR001314
all species →
FamilyPeptidase S1A, chymotrypsin familyInterproscan
IPR012337
all species →
Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128
all species →
Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001584
all species →
DomainIntegrase, catalytic coreInterproscan
IPR002165
all species →
RepeatPlexin repeatInterproscan
IPR001627
all species →
DomainSema domainInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR025724
all species →
DomainGAG-pre-integrase domainInterproscan
IPR041577
all species →
DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11036
all species →
SEMAPHORINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001755
all species →
Biological Processneural crest cell migrationInterproscan
GO:0030215
all species →
Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335
all species →
Biological Processpositive regulation of cell migrationInterproscan
GO:0045499
all species →
Molecular Functionchemorepellent activityInterproscan
GO:0048843
all species →
Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan
GO:0004252
all species →
Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0015074
all species →
Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0019.g11.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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