Detailed information of asel_s0019.g85.t1 in Acropora selago

Genomic Location: sc0000019_pilon:1519443...1539508
NR annotation: XP_044165984.1, PMS1 protein homolog 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P54277PMS1 protein homolog 1 OS=Homo sapiens OX=9606 GN=PMS1 PE=1 SV=1
Q941I6DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana OX=3702 GN=PMS1 PE=1 SV=1
F1NQJ3Mismatch repair endonuclease PMS2 OS=Gallus gallus OX=9031 GN=PMS2 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF01119DNA_mis_repairDNA mismatch repair protein, C-terminal domainFamilyInterproscan
PF13589HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR002099FamilyDNA mismatch repair protein MutL/Mlh/PMSInterproscan
IPR014762Conserved_siteDNA mismatch repair, conserved siteInterproscan
IPR013507DomainDNA mismatch repair protein, S5 domain 2-likeInterproscan
IPR038973FamilyDNA mismatch repair protein MutL/Mlh/Pms-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0032300Cellular Componentmismatch repair complexInterproscan
GO:0032389Cellular ComponentMutLalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04249TSHR; thyrotropin receptor-G protein-coupled receptorsko04030deepkoala

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